(14 nodes) ARID DNA-binding domain network (Chlorocebus sabaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	JARID2	Jumonji and AT-rich interaction domain containing 2. (1246 aa)
	ARID3B	AT-rich interaction domain 3B. (564 aa)
	ARID5B	AT-rich interaction domain 5B. (1127 aa)
	ARID5A	AT-rich interaction domain 5A. (593 aa)
	ARID4A	AT-rich interaction domain 4A. (1006 aa)
	KDM5D	Lysine demethylase 5D. (1539 aa)
	ARID1A	AT-rich interaction domain 1A. (2236 aa)
	KDM5B	Lysine demethylase 5B. (1544 aa)
	ARID1B	AT-rich interaction domain 1B. (1831 aa)
	KDM5C	Lysine demethylase 5C. (1444 aa)
	ARID3A	AT-rich interaction domain 3A. (498 aa)
	KDM5A	Lysine demethylase 5A. (1636 aa)
	ARID3C	AT-rich interaction domain 3C. (412 aa)
	ARID4B	AT-rich interaction domain 4B. (1314 aa)

Your Current Organism:

Chlorocebus sabaeus

NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID1A	ARID1B	ENSCSAP00000017030	ENSCSAP00000009399	AT-rich interaction domain 1A.	AT-rich interaction domain 1B.	0.983
ARID1B	ARID1A	ENSCSAP00000009399	ENSCSAP00000017030	AT-rich interaction domain 1B.	AT-rich interaction domain 1A.	0.983
ARID3A	ARID3B	ENSCSAP00000008724	ENSCSAP00000010364	AT-rich interaction domain 3A.	AT-rich interaction domain 3B.	0.440
ARID3B	ARID3A	ENSCSAP00000010364	ENSCSAP00000008724	AT-rich interaction domain 3B.	AT-rich interaction domain 3A.	0.440
ARID3B	ARID5A	ENSCSAP00000010364	ENSCSAP00000013390	AT-rich interaction domain 3B.	AT-rich interaction domain 5A.	0.499
ARID4A	ARID4B	ENSCSAP00000010551	ENSCSAP00000006309	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.624
ARID4A	ARID5A	ENSCSAP00000010551	ENSCSAP00000013390	AT-rich interaction domain 4A.	AT-rich interaction domain 5A.	0.456
ARID4A	KDM5B	ENSCSAP00000010551	ENSCSAP00000010292	AT-rich interaction domain 4A.	Lysine demethylase 5B.	0.470
ARID4B	ARID4A	ENSCSAP00000006309	ENSCSAP00000010551	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.624
ARID4B	KDM5D	ENSCSAP00000006309	ENSCSAP00000014327	AT-rich interaction domain 4B.	Lysine demethylase 5D.	0.451
ARID5A	ARID3B	ENSCSAP00000013390	ENSCSAP00000010364	AT-rich interaction domain 5A.	AT-rich interaction domain 3B.	0.499
ARID5A	ARID4A	ENSCSAP00000013390	ENSCSAP00000010551	AT-rich interaction domain 5A.	AT-rich interaction domain 4A.	0.456
KDM5B	ARID4A	ENSCSAP00000010292	ENSCSAP00000010551	Lysine demethylase 5B.	AT-rich interaction domain 4A.	0.470
KDM5D	ARID4B	ENSCSAP00000014327	ENSCSAP00000006309	Lysine demethylase 5D.	AT-rich interaction domain 4B.	0.451

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