(51 nodes) UBA-like superfamily network (Chlorocebus sabaeus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TDP2	Tyrosyl-DNA phosphodiesterase 2. (358 aa)
	TSFM	Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (325 aa)
	UBALD2	UBA like domain containing 2. (164 aa)
	TNRC6C	Trinucleotide repeat containing adaptor 6C. (1935 aa)
	SPATS2	Spermatogenesis associated serine rich 2. (544 aa)
	RAD23A	RAD23 homolog A, nucleotide excision repair protein. (363 aa)
	NUB1	Negative regulator of ubiquitin like proteins 1. (639 aa)
	UBXN1	UBX domain protein 1. (297 aa)
	NXF1	Nuclear RNA export factor 1. (619 aa)
	UBQLN1	Ubiquilin 1. (585 aa)
	UBASH3A	Ubiquitin associated and SH3 domain containing A. (623 aa)
	SQSTM1	Sequestosome 1. (440 aa)
	UBXN7	UBX domain protein 7. (521 aa)
	DMRT3	Doublesex and mab-3 related transcription factor 3. (472 aa)
	USP25	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family. (1113 aa)
	UBALD1	UBA like domain containing 1. (177 aa)
	FAF2	Fas associated factor family member 2. (445 aa)
	LOC103232394	Uncharacterized protein. (626 aa)
	ASCC2	Activating signal cointegrator 1 complex subunit 2. (752 aa)
	DMRTA1	DMRT like family A1. (366 aa)
	ILRUN	Inflammation and lipid regulator with UBA-like and NBR1-like domains. (298 aa)
	RHBDD3	Rhomboid domain containing 3. (386 aa)
	TOLLIP	Toll interacting protein. (274 aa)
	UBAP2	Ubiquitin associated protein 2. (1126 aa)
	UBAP1	Ubiquitin associated protein 1. (502 aa)
	USP5	Ubiquitin carboxyl-terminal hydrolase. (843 aa)
	NSFL1C	NSFL1 cofactor. (370 aa)
	SPATS2L	Spermatogenesis associated serine rich 2 like. (583 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (409 aa)
	DHX57	DExH-box helicase 57. (1387 aa)
	HUWE1	HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4374 aa)
	USP13	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (863 aa)
	DCUN1D1	DCN1-like protein. (259 aa)
	UBL7	Ubiquitin like 7. (380 aa)
	UBAC1	UBA domain containing 1. (405 aa)
	RNF31	Uncharacterized protein. (905 aa)
	UBE2K	Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	N4BP2	NEDD4 binding protein 2. (1770 aa)
	LATS1	Large tumor suppressor kinase 1. (1130 aa)
	DCUN1D2	DCN1-like protein. (259 aa)
	UBAC2	UBA domain containing 2. (345 aa)
	TDRD3	Tudor domain containing 3. (744 aa)
	NBR1	NBR1 autophagy cargo receptor. (967 aa)
	USP28	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1139 aa)
	CBL	Cbl proto-oncogene. (907 aa)
	UBASH3B	Ubiquitin associated and SH3 domain containing B. (649 aa)
	DMRTA2	DMRT like family A2. (538 aa)
	VPS13D	Vacuolar protein sorting 13 homolog D. (4387 aa)
	ENSCSAP00000017729	Uncharacterized protein. (366 aa)
	UBQLN2	Ubiquilin 2. (624 aa)
	UBQLN3	Ubiquilin 3. (655 aa)

Your Current Organism:

Chlorocebus sabaeus

NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASCC2	RAD23B	ENSCSAP00000005850	ENSCSAP00000007619	Activating signal cointegrator 1 complex subunit 2.	RAD23 homolog B, nucleotide excision repair protein.	0.429
CBL	UBASH3A	ENSCSAP00000015538	ENSCSAP00000004373	Cbl proto-oncogene.	Ubiquitin associated and SH3 domain containing A.	0.701
CBL	UBASH3B	ENSCSAP00000015538	ENSCSAP00000015614	Cbl proto-oncogene.	Ubiquitin associated and SH3 domain containing B.	0.665
DCUN1D1	UBXN7	ENSCSAP00000009382	ENSCSAP00000004856	DCN1-like protein.	UBX domain protein 7.	0.717
DCUN1D2	UBXN7	ENSCSAP00000013466	ENSCSAP00000004856	DCN1-like protein.	UBX domain protein 7.	0.717
ENSCSAP00000017729	NBR1	ENSCSAP00000017729	ENSCSAP00000014648	Uncharacterized protein.	NBR1 autophagy cargo receptor.	0.827
ENSCSAP00000017729	NUB1	ENSCSAP00000017729	ENSCSAP00000002907	Uncharacterized protein.	Negative regulator of ubiquitin like proteins 1.	0.555
ENSCSAP00000017729	RAD23A	ENSCSAP00000017729	ENSCSAP00000002812	Uncharacterized protein.	RAD23 homolog A, nucleotide excision repair protein.	0.459
ENSCSAP00000017729	RAD23B	ENSCSAP00000017729	ENSCSAP00000007619	Uncharacterized protein.	RAD23 homolog B, nucleotide excision repair protein.	0.459
ENSCSAP00000017729	SQSTM1	ENSCSAP00000017729	ENSCSAP00000004594	Uncharacterized protein.	Sequestosome 1.	0.464
ENSCSAP00000017729	UBAC1	ENSCSAP00000017729	ENSCSAP00000011805	Uncharacterized protein.	UBA domain containing 1.	0.441
ENSCSAP00000017729	UBQLN2	ENSCSAP00000017729	ENSCSAP00000017873	Uncharacterized protein.	Ubiquilin 2.	0.496
ENSCSAP00000017729	UBXN1	ENSCSAP00000017729	ENSCSAP00000002946	Uncharacterized protein.	UBX domain protein 1.	0.515
ENSCSAP00000017729	UBXN7	ENSCSAP00000017729	ENSCSAP00000004856	Uncharacterized protein.	UBX domain protein 7.	0.804
ENSCSAP00000017729	USP13	ENSCSAP00000017729	ENSCSAP00000009269	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.	0.507
ENSCSAP00000017729	USP25	ENSCSAP00000017729	ENSCSAP00000005102	Uncharacterized protein.	Ubiquitin specific peptidase 25; Belongs to the peptidase C19 family.	0.442
ENSCSAP00000017729	USP28	ENSCSAP00000017729	ENSCSAP00000015261	Uncharacterized protein.	Ubiquitin specific peptidase 28; Belongs to the peptidase C19 family.	0.442
ENSCSAP00000017729	USP5	ENSCSAP00000017729	ENSCSAP00000006451	Uncharacterized protein.	Ubiquitin carboxyl-terminal hydrolase.	0.507
FAF2	HUWE1	ENSCSAP00000005601	ENSCSAP00000008706	Fas associated factor family member 2.	HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.	0.517
FAF2	NSFL1C	ENSCSAP00000005601	ENSCSAP00000006842	Fas associated factor family member 2.	NSFL1 cofactor.	0.484

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