STRINGSTRING
DNA2 DNA2 LOC103221971 LOC103221971 H2BC1 H2BC1 H2BC3 H2BC3 H2BC4 H2BC4 H2BC11 H2BC11 LOC103221972 LOC103221972 H2BC13 H2BC13 H2BC14 H2BC14 H2BC15 H2BC15 HIST1H2BO HIST1H2BO ENSCSAP00000018444 ENSCSAP00000018444 ENSCSAP00000018240 ENSCSAP00000018240 ENSCSAP00000018107 ENSCSAP00000018107 LOC103222584 LOC103222584 RMI1 RMI1 H2BC21 H2BC21 ENSCSAP00000017765 ENSCSAP00000017765 ENSCSAP00000017749 ENSCSAP00000017749 H2BU1 H2BU1 LOC103229948 LOC103229948 UBE2NL UBE2NL ENSCSAP00000017611 ENSCSAP00000017611 ENSCSAP00000017575 ENSCSAP00000017575 ENSCSAP00000017561 ENSCSAP00000017561 ENSCSAP00000017472 ENSCSAP00000017472 CLSPN CLSPN ENSCSAP00000016924 ENSCSAP00000016924 ENSCSAP00000016536 ENSCSAP00000016536 POLE POLE UBC UBC POLD1 POLD1 SIRT7 SIRT7 CHEK1 CHEK1 RFC5 RFC5 RAD9B RAD9B ATM ATM ERCC1 ERCC1 MRE11 MRE11 BRCA1 BRCA1 RFC2 RFC2 BRCA2 BRCA2 RFC3 RFC3 CCNA1 CCNA1 RCBTB2 RCBTB2 RCBTB1 RCBTB1 RBBP8 RBBP8 TDRD3 TDRD3 RAD1 RAD1 BLM BLM RFC1 RFC1 RTEL1 RTEL1 ENSCSAP00000012217 ENSCSAP00000012217 POLE4 POLE4 WRN WRN HUS1 HUS1 ATRIP ATRIP RAD17 RAD17 NSD2 NSD2 POLD2 POLD2 POLK POLK POLE2 POLE2 SPIDR SPIDR ENSCSAP00000010913 ENSCSAP00000010913 ABL1 ABL1 SLF1 SLF1 RPS27A RPS27A ENSCSAP00000010000 ENSCSAP00000010000 RPA1 RPA1 RAD50 RAD50 PCNA PCNA TIPIN TIPIN RAD51B RAD51B RPA3 RPA3 EXD2 EXD2 NBN NBN POLE3 POLE3 POLH POLH UBE2I UBE2I RAD52 RAD52 ENSCSAP00000007698 ENSCSAP00000007698 PPP4R2 PPP4R2 EME2 EME2 ATR ATR RHNO1 RHNO1 MEIOB MEIOB RAD51AP1 RAD51AP1 ENSCSAP00000007123 ENSCSAP00000007123 ENSCSAP00000007055 ENSCSAP00000007055 PIAS4 PIAS4 SIRT6 SIRT6 TOPBP1 TOPBP1 RNF8 RNF8 BABAM2 BABAM2 SLX4 SLX4 XRCC3 XRCC3 EXO1 EXO1 H2BW2 H2BW2 ENSCSAP00000005636 ENSCSAP00000005636 ENSCSAP00000005631 ENSCSAP00000005631 BARD1 BARD1 RFC4 RFC4 TP53BP1 TP53BP1 UIMC1 UIMC1 RNF168 RNF168 LOC103232514 LOC103232514 RAD9A RAD9A POLD4 POLD4 RMI2 RMI2 MDC1 MDC1 RECQL4 RECQL4 ERCC4 ERCC4 TOP3A TOP3A KAT5 KAT5 GEN1 GEN1 H2BC5 H2BC5 RAD51 RAD51 ENSCSAP00000003124 ENSCSAP00000003124 PALB2 PALB2 XRCC2 XRCC2 ENSCSAP00000002816 ENSCSAP00000002816 HERC2 HERC2 RAD51D RAD51D SLX1 SLX1 PPP4C PPP4C BRIP1 BRIP1 RAD51C RAD51C BABAM1 BABAM1 EME1 EME1 KXD1 KXD1 UBA52 UBA52 CDK2 CDK2 TIMELESS TIMELESS CDK3 CDK3 SUMO2 SUMO2 ABRAXAS1 ABRAXAS1 POLD3 POLD3 RNF169 RNF169 ENSCSAP00000000080 ENSCSAP00000000080 CCNA2 CCNA2
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DNA2DNA replication helicase/nuclease 2. (1061 aa)
LOC103221971Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC4Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103221972Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC13Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC14Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (126 aa)
HIST1H2BOHistone H2B; Belongs to the histone H2B family. (126 aa)
ENSCSAP00000018444Ubiquitin-like domain-containing protein. (127 aa)
ENSCSAP00000018240Uncharacterized protein. (294 aa)
ENSCSAP00000018107Uncharacterized protein. (295 aa)
LOC103222584UBIQUITIN_CONJUGAT_2 domain-containing protein. (145 aa)
RMI1RecQ mediated genome instability 1. (625 aa)
H2BC21Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCSAP00000017765Ubiquitin-like domain-containing protein. (155 aa)
ENSCSAP00000017749Small ubiquitin-related modifier. (103 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103229948Histone H2B; Belongs to the histone H2B family. (126 aa)
UBE2NLUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
ENSCSAP00000017611Uncharacterized protein. (295 aa)
ENSCSAP00000017575Ubiquitin-like domain-containing protein. (156 aa)
ENSCSAP00000017561Uncharacterized protein. (294 aa)
ENSCSAP00000017472ERCC4 domain-containing protein. (551 aa)
CLSPNUncharacterized protein. (1132 aa)
ENSCSAP00000016924Uncharacterized protein. (199 aa)
ENSCSAP00000016536Uncharacterized protein. (286 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2288 aa)
UBCUncharacterized protein. (228 aa)
POLD1DNA polymerase. (1086 aa)
SIRT7Sirtuin 7. (400 aa)
CHEK1Checkpoint kinase 1. (749 aa)
RFC5Replication factor C subunit 5. (340 aa)
RAD9BCell cycle checkpoint control protein; Belongs to the rad9 family. (417 aa)
ATMSerine-protein kinase ATM; Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates 'Ser-139' of histone variant H2AX/H2AFX at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Also plays a role in pre-B cell allelic exclusion, a process leading to expression of a single immunoglobulin heavy chain allele to enforce clonality and mo [...] (3056 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
MRE11Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (708 aa)
BRCA1Uncharacterized protein. (663 aa)
RFC2Replication factor C subunit 2. (353 aa)
BRCA2BRCA2 DNA repair associated. (3420 aa)
RFC3Replication factor C subunit 3. (356 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (465 aa)
RCBTB2RCC1 and BTB domain containing protein 2. (551 aa)
RCBTB1RCC1 and BTB domain containing protein 1. (531 aa)
RBBP8RB binding protein 8, endonuclease. (897 aa)
TDRD3Tudor domain containing 3. (744 aa)
RAD1RAD1 checkpoint DNA exonuclease. (280 aa)
BLMBLM RecQ like helicase. (1423 aa)
RFC1Replication factor C subunit 1. (985 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1406 aa)
ENSCSAP00000012217Uncharacterized protein. (293 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (117 aa)
WRNWRN RecQ like helicase. (1399 aa)
HUS1Checkpoint protein; Belongs to the HUS1 family. (280 aa)
ATRIPATR interacting protein. (790 aa)
RAD17RAD17 checkpoint clamp loader component. (681 aa)
NSD2Nuclear receptor binding SET domain protein 2. (1365 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
POLKDNA polymerase kappa. (847 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
SPIDRScaffold protein involved in DNA repair. (939 aa)
ENSCSAP00000010913UBIQUITIN_CONJUGAT_2 domain-containing protein. (145 aa)
ABL1Tyrosine-protein kinase. (1130 aa)
SLF1SMC5-SMC6 complex localization factor 1. (1059 aa)
RPS27AUbiquitin-like domain-containing protein. (156 aa)
ENSCSAP00000010000Uncharacterized protein. (254 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (557 aa)
RAD50Zinc-hook domain-containing protein. (1312 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
TIPINTIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (307 aa)
RAD51BRAD51 paralog B. (265 aa)
RPA3Replication protein A3. (121 aa)
EXD2Exonuclease 3'-5' domain containing 2. (636 aa)
NBNNibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. (753 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (147 aa)
POLHDNA polymerase eta. (712 aa)
UBE2IUbiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
RAD52RAD52 homolog, DNA repair protein. (411 aa)
ENSCSAP00000007698MPN domain-containing protein. (285 aa)
PPP4R2Uncharacterized protein. (417 aa)
EME2Essential meiotic structure-specific endonuclease subunit 2. (383 aa)
ATRATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. (2644 aa)
RHNO1RAD9-HUS1-RAD1 interacting nuclear orphan 1. (240 aa)
MEIOBMeiosis specific with OB-fold. (472 aa)
RAD51AP1RAD51 associated protein 1. (354 aa)
ENSCSAP00000007123RAD51_interact domain-containing protein. (319 aa)
ENSCSAP00000007055Uncharacterized protein. (251 aa)
PIAS4Protein inhibitor of activated STAT 4. (501 aa)
SIRT6Sirtuin 6. (355 aa)
TOPBP1DNA topoisomerase II binding protein 1. (1527 aa)
RNF8E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] (485 aa)
BABAM2BRISC and BRCA1 A complex member 2. (415 aa)
SLX4Uncharacterized protein. (929 aa)
XRCC3DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily. (346 aa)
EXO1Exonuclease 1. (845 aa)
H2BW2H2B histone family member M; Belongs to the histone H2B family. (175 aa)
ENSCSAP00000005636Histone domain-containing protein; Belongs to the histone H2B family. (175 aa)
ENSCSAP00000005631Histone domain-containing protein; Belongs to the histone H2B family. (175 aa)
BARD1BRCA1 associated RING domain 1. (777 aa)
RFC4Replication factor C subunit 4. (363 aa)
TP53BP1Tumor protein p53 binding protein 1. (1977 aa)
UIMC1Ubiquitin interaction motif containing 1. (718 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and H2AX and amplifies the RNF8-dependent H2A ubiquitination, promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recruitment of TP53BP1 and BRCA1. Also recrui [...] (571 aa)
LOC103232514RING-type domain-containing protein. (190 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (390 aa)
POLD4Uncharacterized protein. (107 aa)
RMI2RecQ mediated genome instability 2. (147 aa)
MDC1Mediator of DNA damage checkpoint 1. (1964 aa)
RECQL4RecQ like helicase 4. (1210 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (735 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1000 aa)
KAT5Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (522 aa)
GEN1GEN1 Holliday junction 5' flap endonuclease. (907 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (339 aa)
ENSCSAP00000003124BTB domain-containing protein. (463 aa)
PALB2Partner and localizer of BRCA2. (1183 aa)
XRCC2X-ray repair cross complementing 2. (280 aa)
ENSCSAP00000002816MPN domain-containing protein. (320 aa)
HERC2HECT and RLD domain containing E3 ubiquitin protein ligase 2. (4834 aa)
RAD51DDNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA breaks arising during DNA replication or induced by DNA-damaging agents; Belongs to the RecA family. RAD51 subfamily. (328 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. Has a preference for 5'-flap structures, and promotes symmetrical cleavage of static and migrating Holliday junctions (HJs). Resolves HJs by generating two pairs of ligatable, nicked duplex products. (275 aa)
PPP4CSerine/threonine-protein phosphatase. (307 aa)
BRIP1BRCA1 interacting protein C-terminal helicase 1. (1248 aa)
RAD51CRAD51 paralog C. (367 aa)
BABAM1BRISC and BRCA1 A complex member 1. (329 aa)
EME1Essential meiotic structure-specific endonuclease 1. (571 aa)
KXD1KxDL motif containing 1. (176 aa)
UBA52Ubiquitin A-52 residue ribosomal protein fusion product 1. (128 aa)
CDK2Cyclin dependent kinase 2; Belongs to the protein kinase superfamily. (298 aa)
TIMELESSTimeless circadian regulator. (1208 aa)
CDK3Cyclin dependent kinase 3; Belongs to the protein kinase superfamily. (314 aa)
SUMO2Small ubiquitin-related modifier. (95 aa)
ABRAXAS1Abraxas 1, BRCA1 A complex subunit. (409 aa)
POLD3Uncharacterized protein. (466 aa)
RNF169Ring finger protein 169. (486 aa)
ENSCSAP00000000080UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (199 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (432 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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