STRINGSTRING
LIN28B LIN28B ENSCSAP00000010910 ENSCSAP00000010910 ZRSR2 ZRSR2 ENSCSAP00000011163 ENSCSAP00000011163 SNRNP27 SNRNP27 ENSCSAP00000011248 ENSCSAP00000011248 PPIG PPIG PNN PNN CDC40 CDC40 ENSCSAP00000011595 ENSCSAP00000011595 DQX1 DQX1 GCFC2 GCFC2 ENSCSAP00000011985 ENSCSAP00000011985 PPWD1 PPWD1 PRPF6 PRPF6 DHX15 DHX15 HNRNPC HNRNPC MTREX MTREX SDE2 SDE2 USP39 USP39 CCDC12 CCDC12 ENSCSAP00000019219 ENSCSAP00000019219 LOC103226177 LOC103226177 LSM3 LSM3 RNF113A RNF113A PCBP1 PCBP1 RBMXL2 RBMXL2 ENSCSAP00000018803 ENSCSAP00000018803 FAM50B FAM50B NKAPL NKAPL SNRPA SNRPA DDX42 DDX42 HNRNPL HNRNPL DDX5 DDX5 LOC103247984 LOC103247984 DHX38 DHX38 TXNL4B TXNL4B POLR2I POLR2I U2AF1L4 U2AF1L4 SF3B3 SF3B3 RBM42 RBM42 HNRNPD HNRNPD DHX32 DHX32 GPATCH1 GPATCH1 ENSCSAP00000001097 ENSCSAP00000001097 POLR2C POLR2C SRSF2 SRSF2 POLR2B POLR2B SUGP1 SUGP1 ENSCSAP00000001463 ENSCSAP00000001463 TM6SF2 TM6SF2 SMNDC1 SMNDC1 ENSCSAP00000001539 ENSCSAP00000001539 SUGP2 SUGP2 LSM4 LSM4 HNRNPA1 HNRNPA1 LUC7L3 LUC7L3 ENSCSAP00000001797 ENSCSAP00000001797 SRSF1 SRSF1 FUS FUS CHERP CHERP FAM32A FAM32A SNU13 SNU13 CSDC2 CSDC2 PHF5A PHF5A DDX23 DDX23 PRPF19 PRPF19 LOC103227326 LOC103227326 SNRPN SNRPN HNRNPUL2 HNRNPUL2 POLR2G POLR2G NSRP1 NSRP1 POLR2F POLR2F DAW1 DAW1 ZCRB1 ZCRB1 AQR AQR NOL8 NOL8 SF1 SF1 PRPF4B PRPF4B SNRNP48 SNRNP48 PCBP3 PCBP3 HTATSF1 HTATSF1 HNRNPK HNRNPK HNRNPH3 HNRNPH3 UBL5 UBL5 CCAR1 CCAR1 RBMX2 RBMX2 HNRNPM HNRNPM U2AF1 U2AF1 SART1 SART1 SF3B2 SF3B2 PRR3 PRR3 DHX16 DHX16 XAB2 XAB2 SF3B6 SF3B6 WBP11 WBP11 LUC7L2 LUC7L2 HNRNPH1 HNRNPH1 ENSCSAP00000004728 ENSCSAP00000004728 ENSCSAP00000004733 ENSCSAP00000004733 DDX39B DDX39B WDR53 WDR53 ENSCSAP00000004881 ENSCSAP00000004881 YBX3 YBX3 NCBP2 NCBP2 DDX41 DDX41 LOC103224623 LOC103224623 ISY1 ISY1 LSM2 LSM2 PUF60 PUF60 TPRG1 TPRG1 RBM41 RBM41 LRMDA LRMDA HNRNPU HNRNPU ACIN1 ACIN1 PRPF40A PRPF40A CWC27 CWC27 LOC103246669 LOC103246669 POLR2J POLR2J PRKRIP1 PRKRIP1 SRRT SRRT ENSCSAP00000013977 ENSCSAP00000013977 ENSCSAP00000013879 ENSCSAP00000013879 WBP4 WBP4 BUD31 BUD31 GTF2F2 GTF2F2 FAM50A FAM50A SNRPD1 SNRPD1 SNRNP200 SNRNP200 SYNCRIP SYNCRIP SRSF12 SRSF12 ENSCSAP00000013257 ENSCSAP00000013257 PPIL4 PPIL4 WDR70 WDR70 POLR2D POLR2D SNRPA1 SNRPA1 SNRNP70 SNRNP70 CASC3 CASC3 DHX34 DHX34 CWF19L2 CWF19L2 SNRPD2 SNRPD2 PLRG1 PLRG1 CWC15 CWC15 PARPBP PARPBP LSM6 LSM6 DHX8 DHX8 HNRNPUL1 HNRNPUL1 SNRPF SNRPF EFTUD2 EFTUD2 CXorf56 CXorf56 UPF3B UPF3B NKAP NKAP ENSCSAP00000014323 ENSCSAP00000014323 ENSCSAP00000014317 ENSCSAP00000014317 NKTR NKTR SF3A1 SF3A1 MFAP1 MFAP1 ZMAT5 ZMAT5 GTF2F1 GTF2F1 PAXBP1 PAXBP1 SNRPC SNRPC TFIP11 TFIP11 ENSCSAP00000006444 ENSCSAP00000006444 RBM39 RBM39 SRSF3 SRSF3 WDR25 WDR25 PPIL1 PPIL1 SRRM2 SRRM2 SLU7 SLU7 POLR2L POLR2L TMIGD2 TMIGD2 YJU2 YJU2 SNRPD3 SNRPD3 LSM8 LSM8 SNRPB SNRPB PPIL3 PPIL3 NCBP1 NCBP1 CACTIN CACTIN U2SURP U2SURP CRNKL1 CRNKL1 SF3B1 SF3B1 ENSCSAP00000007712 ENSCSAP00000007712 POLR2A POLR2A LSM7 LSM7 SNRPB2 SNRPB2 SF3A2 SF3A2 ZNF318 ZNF318 SNW1 SNW1 SLIRP SLIRP YBX2 YBX2 RBM7 RBM7 RALY RALY POLR2K POLR2K CIRBP CIRBP TCERG1 TCERG1 HNRNPLL HNRNPLL SRSF7 SRSF7 PTBP3 PTBP3 POLR2E POLR2E PRPF4 PRPF4 CDC5L CDC5L DHX9 DHX9 ZMAT2 ZMAT2 IK IK DHX33 DHX33 PDCD7 PDCD7 PTBP1 PTBP1 RBM25 RBM25 LSM8-2 LSM8-2 RBM22 RBM22 SNRNP35 SNRNP35 ENSCSAP00000018390 ENSCSAP00000018390 SNRPE SNRPE LOC103214464 LOC103214464 CXHXorf56 CXHXorf56 HNRNPH2 HNRNPH2 ENSCSAP00000017844 ENSCSAP00000017844 LOC103224623-2 LOC103224623-2 SF3B5 SF3B5 RNF113B RNF113B NCBP2L NCBP2L ENSCSAP00000017627 ENSCSAP00000017627 HNRNPA0 HNRNPA0 CWC22 CWC22 GPKOW GPKOW ZNF830 ZNF830 LOC103247992 LOC103247992 HNRNPCL1 HNRNPCL1 TPRG1L TPRG1L HNRNPR HNRNPR SRSF10 SRSF10 SRRM1 SRRM1 SYF2 SYF2 PPP1R8 PPP1R8 ENSCSAP00000017004 ENSCSAP00000017004 SRSF4 SRSF4 SNRNP40 SNRNP40 SNIP1 SNIP1 SF3A3 SF3A3 PPIE PPIE PPIH PPIH YBX1 YBX1 PRPF38A PRPF38A MAGOH MAGOH SRSF11 SRSF11 PTBP2 PTBP2 RNPC3 RNPC3 BCAS2 BCAS2 U2AF2 U2AF2 RBM8A RBM8A LENG1 LENG1 PRPF31 PRPF31 PRCC PRCC ALYREF ALYREF SRSF9 SRSF9 HSPA8 HSPA8 ENSCSAP00000015417 ENSCSAP00000015417 CWC25 CWC25 BUD13 BUD13 SRSF5 SRSF5 LUC7L LUC7L PRPF18 PRPF18 TXNL4A TXNL4A SRRM3 SRRM3 SAP18 SAP18 SF3B4 SF3B4 PQBP1 PQBP1 SNRNP25 SNRNP25 RALYL RALYL RBM3 RBM3 PPIL2 PPIL2 RBM17 RBM17 RBM10 RBM10 CTNNBL1 CTNNBL1 POLR2H POLR2H PRPF8 PRPF8 DHX35 DHX35 SRSF6 SRSF6 TRA2B TRA2B TRA2A TRA2A HNRNPA2B1 HNRNPA2B1 HNRNPA3 HNRNPA3 RBM5 RBM5 ENSCSAP00000010537 ENSCSAP00000010537 RBM6 RBM6 ENSCSAP00000010769 ENSCSAP00000010769 C9orf78 C9orf78
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIN28BLin-28 homolog B. (208 aa)
ENSCSAP00000010910Uncharacterized protein. (310 aa)
ZRSR2Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. (482 aa)
ENSCSAP00000011163Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (136 aa)
SNRNP27Small nuclear ribonucleoprotein U4/U6.U5 subunit 27. (155 aa)
ENSCSAP00000011248Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
PPIGPeptidylprolyl isomerase G. (468 aa)
PNNPinin, desmosome associated protein. (721 aa)
CDC40Cell division cycle 40. (579 aa)
ENSCSAP00000011595J domain-containing protein. (256 aa)
DQX1DEAQ-box RNA dependent ATPase 1. (717 aa)
GCFC2GC-rich sequence DNA-binding factor 2. (788 aa)
ENSCSAP00000011985Uncharacterized protein. (503 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat containing 1. (646 aa)
PRPF6Pre-mRNA processing factor 6. (947 aa)
DHX15DEAH-box helicase 15. (795 aa)
HNRNPCHeterogeneous nuclear ribonucleoprotein C (C1/C2). (293 aa)
MTREXMtr4 exosome RNA helicase. (1043 aa)
SDE2SDE2 telomere maintenance homolog. (451 aa)
USP39Ubiquitin specific peptidase 39. (565 aa)
CCDC12Coiled-coil domain containing 12. (179 aa)
ENSCSAP00000019219Uncharacterized protein. (320 aa)
LOC103226177Uncharacterized protein. (513 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
RNF113AUncharacterized protein. (335 aa)
PCBP1Poly(rC) binding protein 1. (356 aa)
RBMXL2RRM domain-containing protein. (393 aa)
ENSCSAP00000018803CSP domain-containing protein. (147 aa)
FAM50BFamily with sequence similarity 50 member B. (325 aa)
NKAPLNFKB activating protein like. (405 aa)
SNRPASmall nuclear ribonucleoprotein polypeptide A. (282 aa)
DDX42DEAD-box helicase 42. (942 aa)
HNRNPLHeterogeneous nuclear ribonucleoprotein L. (589 aa)
DDX5DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
LOC103247984Uncharacterized protein. (192 aa)
DHX38DEAH-box helicase 38. (1227 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
U2AF1L4U2 small nuclear RNA auxiliary factor 1 like 4. (203 aa)
SF3B3Splicing factor 3b subunit 3. (1217 aa)
RBM42RNA binding motif protein 42. (451 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D. (355 aa)
DHX32DEAH-box helicase 32 (putative). (744 aa)
GPATCH1G-patch domain containing 1. (930 aa)
ENSCSAP00000001097Uncharacterized protein. (267 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
SRSF2Serine and arginine rich splicing factor 2. (221 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1167 aa)
SUGP1SURP and G-patch domain containing 1. (705 aa)
ENSCSAP00000001463Uncharacterized protein. (297 aa)
TM6SF2Transmembrane 6 superfamily member 2. (377 aa)
SMNDC1Survival motor neuron domain containing 1. (238 aa)
ENSCSAP00000001539RRM domain-containing protein. (298 aa)
SUGP2SURP and G-patch domain containing 2. (1084 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1. (372 aa)
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (472 aa)
ENSCSAP00000001797Uncharacterized protein. (366 aa)
SRSF1Uncharacterized protein. (253 aa)
FUSFUS RNA binding protein. (532 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (916 aa)
FAM32AFamily with sequence similarity 32 member A. (112 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
CSDC2Cold shock domain containing C2. (153 aa)
PHF5APHD finger protein 5A. (110 aa)
DDX23DEAD-box helicase 23. (820 aa)
PRPF19Pre-mRNA processing factor 19. (504 aa)
LOC103227326Uncharacterized protein. (378 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
HNRNPUL2Uncharacterized protein. (778 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
NSRP1Nuclear speckle splicing regulatory protein 1. (558 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
DAW1Dynein assembly factor with WD repeats 1. (415 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1492 aa)
NOL8Nucleolar protein 8. (968 aa)
SF1Splicing factor 1. (548 aa)
PRPF4BPre-mRNA processing factor 4B. (1007 aa)
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (339 aa)
PCBP3Uncharacterized protein. (351 aa)
HTATSF1HIV-1 Tat specific factor 1. (754 aa)
HNRNPKUncharacterized protein. (466 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3. (346 aa)
UBL5Ubiquitin like 5. (73 aa)
CCAR1Cell division cycle and apoptosis regulator 1. (1150 aa)
RBMX2RNA binding motif protein X-linked 2. (324 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (692 aa)
U2AF1Uncharacterized protein. (240 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
PRR3Proline rich 3. (188 aa)
DHX16DEAH-box helicase 16. (1044 aa)
XAB2XPA binding protein 2. (855 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
WBP11WW domain binding protein 11. (641 aa)
LUC7L2LUC7 like 2, pre-mRNA splicing factor. (392 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H1. (423 aa)
ENSCSAP00000004728RRM domain-containing protein. (394 aa)
ENSCSAP00000004733Uncharacterized protein. (462 aa)
DDX39BDExD-box helicase 39B. (425 aa)
WDR53WD repeat domain 53. (358 aa)
ENSCSAP00000004881RRM domain-containing protein. (364 aa)
YBX3Y-box binding protein 3. (373 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (235 aa)
DDX41DEAD-box helicase 41. (622 aa)
LOC103224623Uncharacterized protein. (148 aa)
ISY1Uncharacterized protein. (285 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
PUF60Poly(U) binding splicing factor 60. (516 aa)
TPRG1Tumor protein p63 regulated 1. (279 aa)
RBM41RNA binding motif protein 41. (461 aa)
LRMDALeucine rich melanocyte differentiation associated. (131 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (806 aa)
ACIN1Apoptotic chromatin condensation inducer 1. (1341 aa)
PRPF40APre-mRNA processing factor 40 homolog A. (994 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
LOC103246669Uncharacterized protein. (266 aa)
POLR2JRNA polymerase II subunit J. (117 aa)
PRKRIP1PRKR interacting protein 1. (185 aa)
SRRTSerrate, RNA effector molecule. (876 aa)
ENSCSAP00000013977Uncharacterized protein. (158 aa)
ENSCSAP00000013879Uncharacterized protein. (260 aa)
WBP4WW domain binding protein 4. (375 aa)
BUD31BUD31 homolog. (144 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
FAM50AFamily with sequence similarity 50 member A. (339 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2136 aa)
SYNCRIPSynaptotagmin binding cytoplasmic RNA interacting protein. (562 aa)
SRSF12Serine and arginine rich splicing factor 12. (262 aa)
ENSCSAP00000013257Uncharacterized protein. (321 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (492 aa)
WDR70WD repeat domain 70. (652 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
SNRPA1Small nuclear ribonucleoprotein polypeptide A. (255 aa)
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (428 aa)
CASC3CASC3 exon junction complex subunit. (704 aa)
DHX34DExH-box helicase 34. (1143 aa)
CWF19L2CWF19 like cell cycle control factor 2. (892 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
PLRG1Pleiotropic regulator 1. (514 aa)
CWC15CWC15 spliceosome associated protein homolog. (229 aa)
PARPBPPARP1 binding protein. (581 aa)
LSM6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)
DHX8DEAH-box helicase 8. (1223 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (856 aa)
SNRPFSmall nuclear ribonucleoprotein polypeptide F. (123 aa)
EFTUD2Elongation factor Tu GTP binding domain containing 2. (972 aa)
CXorf56Chromosome X open reading frame 56. (180 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
NKAPNFKB activating protein. (255 aa)
ENSCSAP00000014323RRM domain-containing protein. (478 aa)
ENSCSAP00000014317RRM domain-containing protein. (489 aa)
NKTRNatural killer cell triggering receptor. (1437 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
MFAP1Microfibril associated protein 1. (409 aa)
ZMAT5Zinc finger matrin-type 5. (170 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (438 aa)
PAXBP1PAX3 and PAX7 binding protein 1. (917 aa)
SNRPCU1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...] (178 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
ENSCSAP00000006444Uncharacterized protein. (304 aa)
RBM39RNA binding motif protein 39. (493 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
WDR25WD repeat domain 25. (536 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (118 aa)
SRRM2Serine/arginine repetitive matrix 2. (2752 aa)
SLU7SLU7 homolog, splicing factor. (490 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
TMIGD2Transmembrane and immunoglobulin domain containing 2. (213 aa)
YJU2YJU2 splicing factor homolog. (325 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (231 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
CACTINCactin, spliceosome C complex subunit. (688 aa)
U2SURPU2 snRNP associated SURP domain containing. (1028 aa)
CRNKL1Crooked neck pre-mRNA splicing factor 1. (687 aa)
SF3B1Splicing factor 3b subunit 1. (1304 aa)
ENSCSAP00000007712Uncharacterized protein. (356 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1971 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
SF3A2Splicing factor 3a subunit 2. (471 aa)
ZNF318Zinc finger protein 318. (2099 aa)
SNW1SNW domain containing 1. (536 aa)
SLIRPSRA stem-loop interacting RNA binding protein. (109 aa)
YBX2Y-box binding protein 2. (359 aa)
RBM7RRM domain-containing protein. (269 aa)
RALYRALY heterogeneous nuclear ribonucleoprotein. (315 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
CIRBPCold inducible RNA binding protein. (172 aa)
TCERG1Transcription elongation regulator 1. (1098 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L like. (476 aa)
SRSF7Serine and arginine rich splicing factor 7. (239 aa)
PTBP3Polypyrimidine tract binding protein 3. (524 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
PRPF4Pre-mRNA processing factor 4. (333 aa)
CDC5LCell division cycle 5 like. (802 aa)
DHX9DExH-box helicase 9. (1126 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
IKIK cytokine. (559 aa)
DHX33DEAH-box helicase 33. (764 aa)
PDCD7Programmed cell death 7. (486 aa)
PTBP1Polypyrimidine tract binding protein 1. (556 aa)
RBM25RNA binding motif protein 25. (843 aa)
LSM8-2U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
RBM22Uncharacterized protein. (394 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (246 aa)
ENSCSAP00000018390Uncharacterized protein. (320 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
LOC103214464Uncharacterized protein. (319 aa)
CXHXorf56Uncharacterized protein. (222 aa)
HNRNPH2Heterogeneous nuclear ribonucleoprotein H2. (449 aa)
ENSCSAP00000017844Uncharacterized protein. (372 aa)
LOC103224623-2Protein mago nashi homolog 2. (148 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
RNF113BRing finger protein 113B. (337 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (153 aa)
ENSCSAP00000017627Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (303 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
GPKOWG-patch domain and KOW motifs. (476 aa)
ZNF830Zinc finger protein 830. (372 aa)
LOC103247992Uncharacterized protein. (320 aa)
HNRNPCL1RRM domain-containing protein. (293 aa)
TPRG1LTumor protein p63 regulated 1 like. (272 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R. (480 aa)
SRSF10Serine and arginine rich splicing factor 10. (167 aa)
SRRM1Serine and arginine repetitive matrix 1. (587 aa)
SYF2SYF2 pre-mRNA splicing factor. (243 aa)
PPP1R8Protein phosphatase 1 regulatory subunit 8. (351 aa)
ENSCSAP00000017004J domain-containing protein. (216 aa)
SRSF4Serine and arginine rich splicing factor 4. (494 aa)
SNRNP40Small nuclear ribonucleoprotein U5 subunit 40. (357 aa)
SNIP1Smad nuclear interacting protein 1. (396 aa)
SF3A3Splicing factor 3a subunit 3. (476 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (304 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
YBX1Y-box binding protein 1. (255 aa)
PRPF38APRP38_assoc domain-containing protein. (171 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
SRSF11Serine and arginine rich splicing factor 11. (483 aa)
PTBP2Polypyrimidine tract binding protein 2. (531 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (518 aa)
BCAS2BCAS2 pre-mRNA processing factor. (225 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LENG1Cir_N domain-containing protein. (263 aa)
PRPF31Pre-mRNA processing factor 31. (499 aa)
PRCCProline rich mitotic checkpoint control factor. (491 aa)
ALYREFAly/REF export factor. (264 aa)
SRSF9Serine and arginine rich splicing factor 9. (221 aa)
HSPA8Heat shock protein family A (Hsp70) member 8; Belongs to the heat shock protein 70 family. (646 aa)
ENSCSAP00000015417Uncharacterized protein. (269 aa)
CWC25CWC25 spliceosome associated protein homolog. (423 aa)
BUD13BUD13 homolog. (619 aa)
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
LUC7LLUC7 like. (371 aa)
PRPF18Pre-mRNA processing factor 18. (351 aa)
TXNL4AThioredoxin like 4A. (103 aa)
SRRM3Serine/arginine repetitive matrix 3. (598 aa)
SAP18Sin3A associated protein 18. (172 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
PQBP1Polyglutamine binding protein 1. (265 aa)
SNRNP25Ubiquitin-like domain-containing protein. (265 aa)
RALYLRALY RNA binding protein like. (218 aa)
RBM3RNA binding motif protein 3. (157 aa)
PPIL2Peptidylprolyl isomerase like 2. (521 aa)
RBM17RNA binding motif protein 17. (401 aa)
RBM10RNA binding motif protein 10. (995 aa)
CTNNBL1DUF1716 domain-containing protein. (563 aa)
POLR2HRNA polymerase II subunit H. (187 aa)
PRPF8Pre-mRNA processing factor 8. (2335 aa)
DHX35DEAH-box helicase 35. (703 aa)
SRSF6Serine and arginine rich splicing factor 6. (343 aa)
TRA2BTransformer 2 beta homolog. (288 aa)
TRA2ATransformer 2 alpha homolog. (281 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (378 aa)
RBM5RNA binding motif protein 5. (815 aa)
ENSCSAP00000010537G-patch domain-containing protein. (125 aa)
RBM6RNA binding motif protein 6. (1039 aa)
ENSCSAP00000010769Uncharacterized protein. (265 aa)
C9orf78Chromosome 9 open reading frame 78. (289 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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