STRINGSTRING
SEH1L SEH1L NUP43 NUP43 RANBP2 RANBP2 NUP155 NUP155 WDR33 WDR33 ENSCSAP00000011985 ENSCSAP00000011985 SLBP SLBP RAE1 RAE1 CDC40 CDC40 NUP214 NUP214 SRRM1 SRRM1 NCBP2L NCBP2L LOC103224623-2 LOC103224623-2 NXT2 NXT2 LOC103224623 LOC103224623 NCBP2 NCBP2 DDX39B DDX39B CPSF1 CPSF1 LUZP4 LUZP4 FYTTD1 FYTTD1 U2AF1 U2AF1 NUP153 NUP153 CPSF3 CPSF3 NXF1 NXF1 DDX39A DDX39A NUP160 NUP160 POLDIP3 POLDIP3 NUP188 NUP188 ZC3H11A ZC3H11A GLE1 GLE1 SRSF6 SRSF6 NUP42 NUP42 SHLD1 SHLD1 TPR TPR SRSF5 SRSF5 NUP88 NUP88 NUP35 NUP35 SRSF7 SRSF7 THOC7 THOC7 CPSF2 CPSF2 NCBP1 NCBP1 SLU7 SLU7 SRSF3 SRSF3 THOC6 THOC6 SEC13 SEC13 SRSF1 SRSF1 AAAS AAAS NUP50 NUP50 SARNP SARNP ENSCSAP00000001539 ENSCSAP00000001539 SRSF2 SRSF2 NUP93 NUP93 FIP1L1 FIP1L1 NUP85 NUP85 NUP54 NUP54 U2AF2 U2AF2 CPSF4L CPSF4L U2AF1L4 U2AF1L4 NUP107 NUP107 NUP98 NUP98 DHX38 DHX38 EIF4E EIF4E NUP62 NUP62 NXT1 NXT1 THOC5 THOC5 LOC103232394 LOC103232394 NXF3 NXF3 NUP210 NUP210 THOC3 THOC3 EIF4E1B EIF4E1B NUP62CL NUP62CL NUP205 NUP205 SRSF4 SRSF4 MAGOH MAGOH NDC1 NDC1 SRSF11 SRSF11 C12orf50 C12orf50 RBM8A RBM8A CHTOP CHTOP NUP210L NUP210L ALYREF ALYREF SRSF9 SRSF9 CASC3 CASC3 SYMPK SYMPK NUP37 NUP37 UPF3B UPF3B THOC2 THOC2 POM121C POM121C NUP58 NUP58 CPSF4 CPSF4 THOC1 THOC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEH1LSEH1 like nucleoporin; Belongs to the WD repeat SEC13 family. (421 aa)
NUP43Nucleoporin 43. (380 aa)
RANBP2RAN binding protein 2. (3247 aa)
NUP155Nucleoporin 155. (1080 aa)
WDR33WD repeat domain 33. (1336 aa)
ENSCSAP00000011985Uncharacterized protein. (503 aa)
SLBPStem-loop binding protein. (275 aa)
RAE1Ribonucleic acid export 1. (368 aa)
CDC40Cell division cycle 40. (579 aa)
NUP214Nucleoporin 214. (2090 aa)
SRRM1Serine and arginine repetitive matrix 1. (587 aa)
NCBP2LNuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (153 aa)
LOC103224623-2Protein mago nashi homolog 2. (148 aa)
NXT2Nuclear transport factor 2 like export factor 2. (197 aa)
LOC103224623Uncharacterized protein. (148 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (235 aa)
DDX39BDExD-box helicase 39B. (425 aa)
CPSF1Cleavage and polyadenylation specific factor 1. (1442 aa)
LUZP4Uncharacterized protein. (282 aa)
FYTTD1Forty-two-three domain containing 1. (318 aa)
U2AF1Uncharacterized protein. (240 aa)
NUP153Nucleoporin 153. (1473 aa)
CPSF3Cleavage and polyadenylation specific factor 3. (631 aa)
NXF1Nuclear RNA export factor 1. (619 aa)
DDX39ADExD-box helicase 39A. (427 aa)
NUP160Nucleoporin 160. (1429 aa)
POLDIP3DNA polymerase delta interacting protein 3. (421 aa)
NUP188Nucleoporin 188. (1753 aa)
ZC3H11AUncharacterized protein. (809 aa)
GLE1GLE1 RNA export mediator. (698 aa)
SRSF6Serine and arginine rich splicing factor 6. (343 aa)
NUP42Nucleoporin 42. (423 aa)
SHLD1Shieldin complex subunit 1. (205 aa)
TPRTranslocated promoter region, nuclear basket protein. (2363 aa)
SRSF5Serine and arginine rich splicing factor 5. (272 aa)
NUP88Nucleoporin 88. (741 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (326 aa)
SRSF7Serine and arginine rich splicing factor 7. (239 aa)
THOC7THO complex 7. (204 aa)
CPSF2Cleavage and polyadenylation specificity factor subunit 2. (782 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
SLU7SLU7 homolog, splicing factor. (490 aa)
SRSF3Serine and arginine rich splicing factor 3. (164 aa)
THOC6THO complex 6. (341 aa)
SEC13SEC13 homolog, nuclear pore and COPII coat complex component; Belongs to the WD repeat SEC13 family. (368 aa)
SRSF1Uncharacterized protein. (253 aa)
AAASUncharacterized protein. (229 aa)
NUP50Nucleoporin 50. (468 aa)
SARNPSAP domain containing ribonucleoprotein. (215 aa)
ENSCSAP00000001539RRM domain-containing protein. (298 aa)
SRSF2Serine and arginine rich splicing factor 2. (221 aa)
NUP93Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (819 aa)
FIP1L1Fip1 domain-containing protein. (603 aa)
NUP85Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (656 aa)
NUP54Nucleoporin 54. (508 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (471 aa)
CPSF4LCleavage and polyadenylation specific factor 4 like. (180 aa)
U2AF1L4U2 small nuclear RNA auxiliary factor 1 like 4. (203 aa)
NUP107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (925 aa)
NUP98Nucleoporin 98. (1800 aa)
DHX38DEAH-box helicase 38. (1227 aa)
EIF4EEukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family. (217 aa)
NUP62Nucleoporin 62. (521 aa)
NXT1Nuclear transport factor 2 like export factor 1. (140 aa)
THOC5THO complex 5. (694 aa)
LOC103232394Uncharacterized protein. (626 aa)
NXF3Nuclear RNA export factor 3. (527 aa)
NUP210Nucleoporin 210. (1571 aa)
THOC3THO complex 3. (351 aa)
EIF4E1BEukaryotic translation initiation factor 4E family member 1B; Belongs to the eukaryotic initiation factor 4E family. (247 aa)
NUP62CLNucleoporin 62 C-terminal like. (184 aa)
NUP205Nucleoporin 205. (1450 aa)
SRSF4Serine and arginine rich splicing factor 4. (494 aa)
MAGOHMago homolog, exon junction complex subunit. (146 aa)
NDC1NDC1 transmembrane nucleoporin. (674 aa)
SRSF11Serine and arginine rich splicing factor 11. (483 aa)
C12orf50Chromosome 12 open reading frame 50. (415 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
CHTOPChromatin target of PRMT1. (249 aa)
NUP210LNucleoporin 210 like. (1792 aa)
ALYREFAly/REF export factor. (264 aa)
SRSF9Serine and arginine rich splicing factor 9. (221 aa)
CASC3CASC3 exon junction complex subunit. (704 aa)
SYMPKSymplekin. (1274 aa)
NUP37Nucleoporin 37. (326 aa)
UPF3BUPF3B regulator of nonsense mediated mRNA decay. (483 aa)
THOC2THO complex 2. (1593 aa)
POM121CUncharacterized protein. (1107 aa)
NUP58Nucleoporin 58. (599 aa)
CPSF4Cleavage and polyadenylation specific factor 4. (269 aa)
THOC1THO complex 1. (657 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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