STRINGSTRING
POLR1A POLR1A H2BC14 H2BC14 LOC103221972 LOC103221972 H2BC11 H2BC11 LOC103221946 LOC103221946 H2AC7 H2AC7 H2AC6 H2AC6 H2BC4 H2BC4 H2BC3 H2BC3 LOC103222003 LOC103222003 LOC103221946-2 LOC103221946-2 H2BC1 H2BC1 H2AJ H2AJ LOC103221619 LOC103221619 UBN2 UBN2 GTF2H4 GTF2H4 RRN3 RRN3 ZNRD1 ZNRD1 H2BC5 H2BC5 AIRE AIRE TAF1B TAF1B POLR2F POLR2F MTA2 MTA2 MAPK3 MAPK3 GATAD2A GATAD2A GTF2H1 GTF2H1 H3F3B H3F3B KAT2A KAT2A CD3EAP CD3EAP ERCC2 ERCC2 CAVIN1 CAVIN1 TAF1C TAF1C TAF1D TAF1D UBTF UBTF MBD2 MBD2 ERCC3 ERCC3 POLR1B POLR1B TBPL1 TBPL1 H2BC15 H2BC15 TAF1A TAF1A POLR1C POLR1C TBP TBP CHD3 CHD3 POLR1E POLR1E POLR2L POLR2L CHD4 CHD4 ERCC6 ERCC6 KAT2B KAT2B H2BW2 H2BW2 MTA1 MTA1 ENSCSAP00000005636 ENSCSAP00000005636 ENSCSAP00000005631 ENSCSAP00000005631 EHMT2 EHMT2 CDK7 CDK7 GTF2H2 GTF2H2 H2AZ2 H2AZ2 HDAC2 HDAC2 TTF1 TTF1 RBBP7 RBBP7 CCNH CCNH MNAT1 MNAT1 POLR2H POLR2H ENSCSAP00000009816 ENSCSAP00000009816 TWISTNB TWISTNB GTF2H5 GTF2H5 MTA3 MTA3 DMTF1 DMTF1 POLR2E POLR2E POLR2K POLR2K LOC103232061 LOC103232061 MBD3 MBD3 C11orf88 C11orf88 GTF2H3 GTF2H3 ENSCSAP00000016053 ENSCSAP00000016053 GATAD2B GATAD2B HDAC1 HDAC1 CHD5 CHD5 H2AX H2AX LOC103232850 LOC103232850 LOC103232850-2 LOC103232850-2 ENSCSAP00000017607 ENSCSAP00000017607 LOC103229948 LOC103229948 H2BU1 H2BU1 ENSCSAP00000017750 ENSCSAP00000017750 H2AC20 H2AC20 LOC103247786 LOC103247786 LOC103232262 LOC103232262 ENSCSAP00000017985 ENSCSAP00000017985 MBD3L1 MBD3L1 HIST1H2BO HIST1H2BO H3C11 H3C11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLR1ARNA polymerase I subunit A. (1720 aa)
H2BC14Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103221972Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC11Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103221946Histone H3.1. (136 aa)
H2AC7Histone H2A; Belongs to the histone H2A family. (130 aa)
H2AC6Histone H2A; Belongs to the histone H2A family. (130 aa)
H2BC4Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BC3Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC103222003Histone H2A; Belongs to the histone H2A family. (130 aa)
LOC103221946-2Histone H3.1. (136 aa)
H2BC1Histone H2B; Belongs to the histone H2B family. (127 aa)
H2AJHistone H2A; Belongs to the histone H2A family. (129 aa)
LOC103221619Histone domain-containing protein. (136 aa)
UBN2Ubinuclein 2. (1170 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
RRN3RRN3 homolog, RNA polymerase I transcription factor. (651 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
H2BC5Histone H2B; Belongs to the histone H2B family. (126 aa)
AIREAutoimmune regulator. (548 aa)
TAF1BTATA-box binding protein associated factor, RNA polymerase I subunit B. (588 aa)
POLR2FRNA polymerase II subunit F. (127 aa)
MTA2Metastasis associated 1 family member 2. (668 aa)
MAPK3Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily. (379 aa)
GATAD2AGATA-type domain-containing protein. (634 aa)
GTF2H1General transcription factor IIH subunit 1. (548 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
KAT2AHistone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily. (837 aa)
CD3EAPCD3e molecule associated protein. (513 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (736 aa)
CAVIN1Caveolae associated protein 1. (467 aa)
TAF1CTATA-box binding protein associated factor, RNA polymerase I subunit C. (843 aa)
TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D. (278 aa)
UBTFUpstream binding transcription factor. (701 aa)
MBD2Methyl-CpG binding domain protein 2. (262 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
POLR1BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1135 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
H2BC15Histone H2B; Belongs to the histone H2B family. (126 aa)
TAF1ATATA-box binding protein associated factor, RNA polymerase I subunit A. (451 aa)
POLR1CRNA polymerase I and III subunit C. (346 aa)
TBPTATA-box binding protein. (270 aa)
CHD3Chromodomain helicase DNA binding protein 3. (1965 aa)
POLR1ERNA polymerase I subunit E. (419 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
CHD4Uncharacterized protein. (1914 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1494 aa)
KAT2BLysine acetyltransferase 2B. (675 aa)
H2BW2H2B histone family member M; Belongs to the histone H2B family. (175 aa)
MTA1Metastasis associated 1. (714 aa)
ENSCSAP00000005636Histone domain-containing protein; Belongs to the histone H2B family. (175 aa)
ENSCSAP00000005631Histone domain-containing protein; Belongs to the histone H2B family. (175 aa)
EHMT2Euchromatic histone lysine methyltransferase 2. (1197 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
H2AZ2Histone H2A; Belongs to the histone H2A family. (128 aa)
HDAC2Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (488 aa)
TTF1Transcription termination factor 1. (916 aa)
RBBP7RB binding protein 7, chromatin remodeling factor. (425 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLR2HRNA polymerase II subunit H. (187 aa)
ENSCSAP00000009816Histone H3; Belongs to the histone H3 family. (136 aa)
TWISTNBTWIST neighbor. (338 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
MTA3Metastasis associated 1 family member 3. (594 aa)
DMTF1Cyclin D binding myb like transcription factor 1. (761 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
LOC103232061Histone domain-containing protein. (136 aa)
MBD3Methyl-CpG binding domain protein 3. (291 aa)
C11orf88Chromosome 11 open reading frame 88. (170 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
ENSCSAP00000016053Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (497 aa)
GATAD2BGATA zinc finger domain containing 2B. (593 aa)
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
CHD5Chromodomain helicase DNA binding protein 5. (1954 aa)
H2AXHistone H2A; Belongs to the histone H2A family. (143 aa)
LOC103232850Histone H2A; Belongs to the histone H2A family. (115 aa)
LOC103232850-2Histone H2A-Bbd type 2/3-like. (115 aa)
ENSCSAP00000017607Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC103229948Histone H2B; Belongs to the histone H2B family. (126 aa)
H2BU1Histone H2B; Belongs to the histone H2B family. (126 aa)
ENSCSAP00000017750Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (479 aa)
H2AC20Histone H2A; Belongs to the histone H2A family. (129 aa)
LOC103247786Histone H3; Belongs to the histone H3 family. (136 aa)
LOC103232262Histone H3; Belongs to the histone H3 family. (136 aa)
ENSCSAP00000017985Histone H2A; Belongs to the histone H2A family. (128 aa)
MBD3L1Methyl-CpG binding domain protein 3 like 1. (194 aa)
HIST1H2BOHistone H2B; Belongs to the histone H2B family. (126 aa)
H3C11Histone H3; Belongs to the histone H3 family. (136 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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