STRINGSTRING
HDAC1 HDAC1 CCNA1 CCNA1 RXRA RXRA ETV1 ETV1 TBP TBP CASP2 CASP2 FUS FUS ALB ALB CCNA2 CCNA2 CASP3 CASP3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HDAC1Histone deacetylase 1; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. (482 aa)
CCNA1Cyclin A1; Belongs to the cyclin family. (465 aa)
RXRARetinoid X receptor alpha. (462 aa)
ETV1ETS variant 1. (477 aa)
TBPTATA-box binding protein. (270 aa)
CASP2Caspase 2; Belongs to the peptidase C14A family. (453 aa)
FUSFUS RNA binding protein. (532 aa)
ALBAlbumin. (512 aa)
CCNA2Cyclin A2; Belongs to the cyclin family. (432 aa)
CASP3Caspase 3; Belongs to the peptidase C14A family. (277 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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