STRINGSTRING
POLD3 POLD3 DDB2 DDB2 RBX1 RBX1 DDB1 DDB1 RAD23A RAD23A CETN2 CETN2 ERCC4 ERCC4 GTF2H4 GTF2H4 POLD4 POLD4 RFC4 RFC4 XPC XPC XPA XPA RAD23B RAD23B POLE3 POLE3 RPA3 RPA3 PCNA PCNA MNAT1 MNAT1 CCNH CCNH POLE2 POLE2 POLD2 POLD2 GTF2H2 GTF2H2 POLE4 POLE4 CDK7 CDK7 ERCC8 ERCC8 ERCC3 ERCC3 RFC1 RFC1 CUL4A CUL4A ERCC5 ERCC5 RFC3 RFC3 CUL4B CUL4B ERCC2 ERCC2 ERCC1 ERCC1 LIG1 LIG1 RFC5 RFC5 POLD1 POLD1 GTF2H3 GTF2H3 POLE POLE RPA2 RPA2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
POLD3Uncharacterized protein. (466 aa)
DDB2Damage specific DNA binding protein 2. (427 aa)
RBX1Ring-box 1. (108 aa)
DDB1Damage specific DNA binding protein 1. (1140 aa)
RAD23ARAD23 homolog A, nucleotide excision repair protein. (363 aa)
CETN2Centrin 2. (163 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (735 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
POLD4Uncharacterized protein. (107 aa)
RFC4Replication factor C subunit 4. (363 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (888 aa)
XPAXPA, DNA damage recognition and repair factor. (226 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (409 aa)
POLE3DNA polymerase epsilon 3, accessory subunit. (147 aa)
RPA3Replication protein A3. (121 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
CCNHCyclin H; Belongs to the cyclin family. (323 aa)
POLE2DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (527 aa)
POLD2DNA polymerase delta 2, accessory subunit. (469 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
POLE4DNA polymerase epsilon 4, accessory subunit. (117 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
ERCC8ERCC excision repair 8, CSA ubiquitin ligase complex subunit. (396 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
RFC1Replication factor C subunit 1. (985 aa)
CUL4ACullin 4A; Belongs to the cullin family. (759 aa)
ERCC5ERCC excision repair 5, endonuclease. (1182 aa)
RFC3Replication factor C subunit 3. (356 aa)
CUL4BCullin 4B; Belongs to the cullin family. (900 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (736 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (298 aa)
LIG1DNA ligase. (919 aa)
RFC5Replication factor C subunit 5. (340 aa)
POLD1DNA polymerase. (1086 aa)
GTF2H3General transcription factor IIH subunit 3. (309 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2288 aa)
RPA2Replication protein A2. (270 aa)
Your Current Organism:
Chlorocebus sabaeus
NCBI taxonomy Id: 60711
Other names: C. sabaeus, Cercopithecus aethiops sabaeus, Cercopithecus sabaeus, Cercopithecus sabeus, Chlorocebus aethiops sabaeus, Chlorocebus aethiops sabeus, Chlorocebus sabeus, green monkey
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