Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADL42225.1 | ADL42235.1 | COB47_0918 | COB47_0930 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | 0.758 |
| ADL42225.1 | ADL42236.1 | COB47_0918 | COB47_0931 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.959 |
| ADL42225.1 | ADL42237.1 | COB47_0918 | COB47_0932 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | 0.991 |
| ADL42225.1 | csrA | COB47_0918 | COB47_0913 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.674 |
| ADL42225.1 | fliW | COB47_0918 | COB47_0912 | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.931 |
| ADL42235.1 | ADL42225.1 | COB47_0930 | COB47_0918 | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.758 |
| ADL42235.1 | ADL42236.1 | COB47_0930 | COB47_0931 | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.995 |
| ADL42235.1 | ADL42237.1 | COB47_0930 | COB47_0932 | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | 0.988 |
| ADL42235.1 | csrA | COB47_0930 | COB47_0913 | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.579 |
| ADL42235.1 | fliW | COB47_0930 | COB47_0912 | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.984 |
| ADL42236.1 | ADL42225.1 | COB47_0931 | COB47_0918 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.959 |
| ADL42236.1 | ADL42235.1 | COB47_0931 | COB47_0930 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | 0.995 |
| ADL42236.1 | ADL42237.1 | COB47_0931 | COB47_0932 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | 0.997 |
| ADL42236.1 | csrA | COB47_0931 | COB47_0913 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.683 |
| ADL42236.1 | fliW | COB47_0931 | COB47_0912 | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.882 |
| ADL42237.1 | ADL42225.1 | COB47_0932 | COB47_0918 | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.991 |
| ADL42237.1 | ADL42235.1 | COB47_0932 | COB47_0930 | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | PFAM: flagellar protein FlaG protein; KEGG: csc:Csac_1698 flagellar protein FlaG protein. | 0.988 |
| ADL42237.1 | ADL42236.1 | COB47_0932 | COB47_0931 | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.997 |
| ADL42237.1 | csrA | COB47_0932 | COB47_0913 | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.853 |
| ADL42237.1 | fliW | COB47_0932 | COB47_0912 | KEGG: ate:Athe_1652 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS. | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.920 |
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