(5 nodes) Preribosome, small subunit precursor network (Harpegnathos saltator)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EAI_17144	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family. (461 aa)
	EAI_02201	Serine/threonine-protein kinase RIO2. (566 aa)
	EAI_09288	Pre-rRNA-processing protein TSR1-like protein. (801 aa)
	EAI_07140	Uncharacterized methyltransferase WBSCR22. (276 aa)
	EAI_04577	Uncharacterized protein. (548 aa)

Your Current Organism:

Harpegnathos saltator

NCBI taxonomy Id: 610380
Other names: H. saltator

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAI_02201	EAI_04577	E2BLQ4	E2C8Z2	Serine/threonine-protein kinase RIO2.	Uncharacterized protein.	0.991
EAI_02201	EAI_07140	E2BLQ4	E2C601	Serine/threonine-protein kinase RIO2.	Uncharacterized methyltransferase WBSCR22.	0.918
EAI_02201	EAI_09288	E2BLQ4	E2BPW1	Serine/threonine-protein kinase RIO2.	Pre-rRNA-processing protein TSR1-like protein.	0.998
EAI_02201	EAI_17144	E2BLQ4	E2BKQ7	Serine/threonine-protein kinase RIO2.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.999
EAI_04577	EAI_02201	E2C8Z2	E2BLQ4	Uncharacterized protein.	Serine/threonine-protein kinase RIO2.	0.991
EAI_04577	EAI_07140	E2C8Z2	E2C601	Uncharacterized protein.	Uncharacterized methyltransferase WBSCR22.	0.940
EAI_04577	EAI_09288	E2C8Z2	E2BPW1	Uncharacterized protein.	Pre-rRNA-processing protein TSR1-like protein.	0.991
EAI_04577	EAI_17144	E2C8Z2	E2BKQ7	Uncharacterized protein.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.996
EAI_07140	EAI_02201	E2C601	E2BLQ4	Uncharacterized methyltransferase WBSCR22.	Serine/threonine-protein kinase RIO2.	0.918
EAI_07140	EAI_04577	E2C601	E2C8Z2	Uncharacterized methyltransferase WBSCR22.	Uncharacterized protein.	0.940
EAI_07140	EAI_09288	E2C601	E2BPW1	Uncharacterized methyltransferase WBSCR22.	Pre-rRNA-processing protein TSR1-like protein.	0.982
EAI_07140	EAI_17144	E2C601	E2BKQ7	Uncharacterized methyltransferase WBSCR22.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.965
EAI_09288	EAI_02201	E2BPW1	E2BLQ4	Pre-rRNA-processing protein TSR1-like protein.	Serine/threonine-protein kinase RIO2.	0.998
EAI_09288	EAI_04577	E2BPW1	E2C8Z2	Pre-rRNA-processing protein TSR1-like protein.	Uncharacterized protein.	0.991
EAI_09288	EAI_07140	E2BPW1	E2C601	Pre-rRNA-processing protein TSR1-like protein.	Uncharacterized methyltransferase WBSCR22.	0.982
EAI_09288	EAI_17144	E2BPW1	E2BKQ7	Pre-rRNA-processing protein TSR1-like protein.	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	0.999
EAI_17144	EAI_02201	E2BKQ7	E2BLQ4	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Serine/threonine-protein kinase RIO2.	0.999
EAI_17144	EAI_04577	E2BKQ7	E2C8Z2	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Uncharacterized protein.	0.996
EAI_17144	EAI_07140	E2BKQ7	E2C601	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Uncharacterized methyltransferase WBSCR22.	0.965
EAI_17144	EAI_09288	E2BKQ7	E2BPW1	RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.	Pre-rRNA-processing protein TSR1-like protein.	0.999