(14 nodes) Vitamin B6 metabolism network (Linderina pennispora)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1Y1VQ19	Uncharacterized protein. (91 aa)
	A0A1Y1W0P1	Ribokinase-like protein. (308 aa)
	A0A1Y1VZE3	Aldo_ket_red domain-containing protein. (131 aa)
	A0A1Y1WMP6	SNO glutamine amidotransferase. (197 aa)
	A0A1Y1WMS9	3-phosphoserine/phosphohydroxythreonine aminotransferase. (388 aa)
	A0A1Y1WJ46	Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family. (311 aa)
	A0A1Y1WI73	Aldo/keto reductase. (348 aa)
	A0A1Y1WHS9	Aryl alcohol dehydrogenase. (287 aa)
	A0A1Y1WFX8	Pyridox_oxase_2 domain-containing protein. (255 aa)
	A0A1Y1WBR3	Pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family. (301 aa)
	A0A1Y1WAH3	Tryptophan synthase beta subunit-like PLP-dependent enzyme. (505 aa)
	A0A1Y1W3Q6	Zincin. (109 aa)
	A0A1Y1VYW7	Aldo/keto reductase. (318 aa)
	A0A1Y1VYA6	Aldo/keto reductase. (128 aa)

Your Current Organism:

Linderina pennispora

NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1Y1VQ19	A0A1Y1WAH3	Uncharacterized protein.	Tryptophan synthase beta subunit-like PLP-dependent enzyme.	0.858
A0A1Y1VQ19	A0A1Y1WBR3	Uncharacterized protein.	Pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family.	0.454
A0A1Y1VQ19	A0A1Y1WJ46	Uncharacterized protein.	Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family.	0.454
A0A1Y1VYA6	A0A1Y1VZE3	Aldo/keto reductase.	Aldo_ket_red domain-containing protein.	0.536
A0A1Y1VYA6	A0A1Y1W0P1	Aldo/keto reductase.	Ribokinase-like protein.	0.498
A0A1Y1VYA6	A0A1Y1WFX8	Aldo/keto reductase.	Pyridox_oxase_2 domain-containing protein.	0.519
A0A1Y1VYW7	A0A1Y1W0P1	Aldo/keto reductase.	Ribokinase-like protein.	0.498
A0A1Y1VYW7	A0A1Y1WFX8	Aldo/keto reductase.	Pyridox_oxase_2 domain-containing protein.	0.519
A0A1Y1VZE3	A0A1Y1VYA6	Aldo_ket_red domain-containing protein.	Aldo/keto reductase.	0.536
A0A1Y1VZE3	A0A1Y1W0P1	Aldo_ket_red domain-containing protein.	Ribokinase-like protein.	0.498
A0A1Y1VZE3	A0A1Y1WFX8	Aldo_ket_red domain-containing protein.	Pyridox_oxase_2 domain-containing protein.	0.519
A0A1Y1W0P1	A0A1Y1VYA6	Ribokinase-like protein.	Aldo/keto reductase.	0.498
A0A1Y1W0P1	A0A1Y1VYW7	Ribokinase-like protein.	Aldo/keto reductase.	0.498
A0A1Y1W0P1	A0A1Y1VZE3	Ribokinase-like protein.	Aldo_ket_red domain-containing protein.	0.498
A0A1Y1W0P1	A0A1Y1WBR3	Ribokinase-like protein.	Pyridoxine biosynthesis protein; Belongs to the PdxS/SNZ family.	0.741
A0A1Y1W0P1	A0A1Y1WFX8	Ribokinase-like protein.	Pyridox_oxase_2 domain-containing protein.	0.787
A0A1Y1W0P1	A0A1Y1WHS9	Ribokinase-like protein.	Aryl alcohol dehydrogenase.	0.498
A0A1Y1W0P1	A0A1Y1WI73	Ribokinase-like protein.	Aldo/keto reductase.	0.498
A0A1Y1W0P1	A0A1Y1WJ46	Ribokinase-like protein.	Pyridoxine biosynthesis protein pyroA; Belongs to the PdxS/SNZ family.	0.741
A0A1Y1W0P1	A0A1Y1WMP6	Ribokinase-like protein.	SNO glutamine amidotransferase.	0.827