(60 nodes) Phagosome network (Linderina pennispora)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:
	A0A1Y1W727	Putative VPS21-Rab5-like GTPase. (253 aa)
	A0A1Y1WLB4	Mitochondrial import protein Pam17. (182 aa)
	A0A1Y1W6G4	NAD(P)-binding protein. (312 aa)
	A0A1Y1W661	FAD-binding FR-type domain-containing protein. (453 aa)
	A0A1Y1W5M9	Putative vacuolar ATP synthase 22 kDa proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family. (206 aa)
	A0A1Y1W4Z9	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase. (876 aa)
	A0A1Y1W4T3	Ras-domain-containing protein. (202 aa)
	A0A1Y1W4L5	DUF654-domain-containing protein. (607 aa)
	A0A1Y1W4J8	PHD-type domain-containing protein. (425 aa)
	A0A1Y1W3R8	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (449 aa)
	A0A1Y1W3Q5	Mitochondrial import inner membrane translocase subunit TIM9. (94 aa)
	A0A1Y1W244	FAD-binding FR-type domain-containing protein. (658 aa)
	A0A1Y1W237	FAD-binding FR-type domain-containing protein. (196 aa)
	A0A1Y1W1Y2	FAD-binding FR-type domain-containing protein. (549 aa)
	A0A1Y1W922	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (462 aa)
	A0A1Y1W8K6	Phosphatidylinositol 3-kinase VPS34. (788 aa)
	A0A1Y1W7S8	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (447 aa)
	A0A1Y1W1N7	SecY protein; Belongs to the SecY/SEC61-alpha family. (456 aa)
	A0A1Y1W1C9	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (110 aa)
	A0A1Y1W0B7	Uncharacterized protein. (262 aa)
	A0A1Y1VZU9	Uncharacterized protein. (192 aa)
	A0A1Y1VZQ3	SecE-domain-containing protein. (76 aa)
	A0A1Y1VZ22	DUF1900-domain-containing protein. (881 aa)
	A0A1Y1VYN3	Syntaxin-18_N domain-containing protein. (331 aa)
	A0A1Y1VYM1	Uncharacterized protein. (470 aa)
	A0A1Y1VXX6	Ras-domain-containing protein. (194 aa)
	A0A1Y1VT69	P-loop containing nucleoside triphosphate hydrolase protein. (439 aa)
	A0A1Y1WDD2	Calreticulin-domain-containing protein. (542 aa)
	A0A1Y1WD93	Calreticulin-domain-containing protein. (507 aa)
	A0A1Y1WCU2	Vacuolar ATP synthase catalytic subunit A. (1078 aa)
	A0A1Y1WCR3	Snare-like protein; Belongs to the synaptobrevin family. (217 aa)
	A0A1Y1WCK8	V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (368 aa)
	A0A1Y1WCD9	FAD-binding FR-type domain-containing protein. (692 aa)
	A0A1Y1WBL5	DLIC-domain-containing protein. (376 aa)
	A0A1Y1W998	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (462 aa)
	A0A1Y1WGK2	Initiation factor 2. (894 aa)
	A0A1Y1WGI6	PB1 domain-containing protein. (668 aa)
	A0A1Y1WF75	FAD-binding FR-type domain-containing protein. (663 aa)
	A0A1Y1WM07	FAD-binding FR-type domain-containing protein. (488 aa)
	A0A1Y1WMX5	Uncharacterized protein. (564 aa)
	A0A1Y1WN13	FAD-binding FR-type domain-containing protein. (569 aa)
	A0A1Y1WN47	ATPase, V0 complex, subunit D. (294 aa)
	A0A1Y1W6X6	DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (447 aa)
	A0A1Y1W6S7	FAD-binding FR-type domain-containing protein. (474 aa)
	A0A1Y1W944	V-type proton ATPase subunit F; Subunit of the peripheral V1 complex of vacuolar ATPase essential for assembly or catalytic function. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (119 aa)
	A0A1Y1WF49	Uncharacterized protein. (2988 aa)
	A0A1Y1WDP7	Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. (512 aa)
	A0A1Y1WGM8	Uncharacterized protein. (206 aa)
	A0A1Y1WHA4	ARM repeat-containing protein. (409 aa)
	A0A1Y1WHT1	DUF1900-domain-containing protein. (603 aa)
	A0A1Y1WHV7	Putative cytoplasmic heavy chain dynein. (4540 aa)
	A0A1Y1WIK5	Uncharacterized protein. (68 aa)
	A0A1Y1WIQ0	V-type proton ATPase proteolipid subunit; Proton-conducting pore forming subunit of the membrane integral V0 complex of vacuolar ATPase. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (167 aa)
	A0A1Y1WJJ5	WD40 repeat-like protein. (436 aa)
	A0A1Y1WJU0	RCC1/BLIP-II protein. (423 aa)
	DL89DRAFT_6163	Uncharacterized protein. (772 aa)
	A0A1Y1WK68	PHD-type domain-containing protein. (324 aa)
	A0A1Y1WK90	SAICAR synthase-like protein. (414 aa)
	A0A1Y1WKD9	Uncharacterized protein. (249 aa)
	A0A1Y1WL74	P-loop containing nucleoside triphosphate hydrolase protein. (139 aa)

Your Current Organism:

Linderina pennispora

NCBI taxonomy Id: 61395
Other names: ATCC 12442, CBS 312.51, L. pennispora, NRRL 2237

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1Y1VXX6	A0A1Y1VZU9	A0A1Y1VXX6	A0A1Y1VZU9	Ras-domain-containing protein.	Uncharacterized protein.	0.555
A0A1Y1VXX6	A0A1Y1W0B7	A0A1Y1VXX6	A0A1Y1W0B7	Ras-domain-containing protein.	Uncharacterized protein.	0.647
A0A1Y1VXX6	A0A1Y1W4T3	A0A1Y1VXX6	A0A1Y1W4T3	Ras-domain-containing protein.	Ras-domain-containing protein.	0.837
A0A1Y1VXX6	A0A1Y1W4Z9	A0A1Y1VXX6	A0A1Y1W4Z9	Ras-domain-containing protein.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.681
A0A1Y1VXX6	A0A1Y1W8K6	A0A1Y1VXX6	A0A1Y1W8K6	Ras-domain-containing protein.	Phosphatidylinositol 3-kinase VPS34.	0.911
A0A1Y1VXX6	A0A1Y1WBL5	A0A1Y1VXX6	A0A1Y1WBL5	Ras-domain-containing protein.	DLIC-domain-containing protein.	0.413
A0A1Y1VXX6	A0A1Y1WJU0	A0A1Y1VXX6	A0A1Y1WJU0	Ras-domain-containing protein.	RCC1/BLIP-II protein.	0.658
A0A1Y1VXX6	A0A1Y1WL74	A0A1Y1VXX6	A0A1Y1WL74	Ras-domain-containing protein.	P-loop containing nucleoside triphosphate hydrolase protein.	0.856
A0A1Y1VYM1	A0A1Y1VZU9	A0A1Y1VYM1	A0A1Y1VZU9	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A1Y1VYM1	A0A1Y1W4Z9	A0A1Y1VYM1	A0A1Y1W4Z9	Uncharacterized protein.	V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.	0.426
A0A1Y1VYM1	A0A1Y1W8K6	A0A1Y1VYM1	A0A1Y1W8K6	Uncharacterized protein.	Phosphatidylinositol 3-kinase VPS34.	0.453
A0A1Y1VYN3	A0A1Y1W4J8	A0A1Y1VYN3	A0A1Y1W4J8	Syntaxin-18_N domain-containing protein.	PHD-type domain-containing protein.	0.631
A0A1Y1VYN3	A0A1Y1WCR3	A0A1Y1VYN3	A0A1Y1WCR3	Syntaxin-18_N domain-containing protein.	Snare-like protein; Belongs to the synaptobrevin family.	0.788
A0A1Y1VYN3	A0A1Y1WK68	A0A1Y1VYN3	A0A1Y1WK68	Syntaxin-18_N domain-containing protein.	PHD-type domain-containing protein.	0.631
A0A1Y1VZQ3	A0A1Y1W1N7	A0A1Y1VZQ3	A0A1Y1W1N7	SecE-domain-containing protein.	SecY protein; Belongs to the SecY/SEC61-alpha family.	0.996
A0A1Y1VZU9	A0A1Y1VXX6	A0A1Y1VZU9	A0A1Y1VXX6	Uncharacterized protein.	Ras-domain-containing protein.	0.555
A0A1Y1VZU9	A0A1Y1VYM1	A0A1Y1VZU9	A0A1Y1VYM1	Uncharacterized protein.	Uncharacterized protein.	0.646
A0A1Y1VZU9	A0A1Y1W0B7	A0A1Y1VZU9	A0A1Y1W0B7	Uncharacterized protein.	Uncharacterized protein.	0.544
A0A1Y1VZU9	A0A1Y1W1C9	A0A1Y1VZU9	A0A1Y1W1C9	Uncharacterized protein.	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.	0.554
A0A1Y1VZU9	A0A1Y1W1Y2	A0A1Y1VZU9	A0A1Y1W1Y2	Uncharacterized protein.	FAD-binding FR-type domain-containing protein.	0.434