STRINGSTRING
LOC108521487 LOC108521487 NEIL3 NEIL3 SSBP4 SSBP4 ENSRBIP00000004884 ENSRBIP00000004884 PURB PURB NABP1 NABP1 HNRNPA2B1 HNRNPA2B1 FAM111A FAM111A CRY2 CRY2 TEN1 TEN1 POLR2G POLR2G SMC2 SMC2 ENSRBIP00000000804 ENSRBIP00000000804 BRCA2 BRCA2 SAMHD1 SAMHD1 NUCKS1 NUCKS1 SMC6 SMC6 POLR2H POLR2H LOC108537870 LOC108537870 TDP1 TDP1 MCM7 MCM7 TERF2IP TERF2IP RNF138 RNF138 WDR48 WDR48 SHOC1 SHOC1 ENSRBIP00000019027 ENSRBIP00000019027 RECQL4 RECQL4 WBP11 WBP11 POU4F1 POU4F1 MCM2 MCM2 ENSRBIP00000021679 ENSRBIP00000021679 RECQL RECQL POLR3C POLR3C MCM5 MCM5 YBX1 YBX1 RAD51B RAD51B SMARCA1 SMARCA1 RPA2 RPA2 RPA1 RPA1 TDP2 TDP2 HROB HROB REXO4 REXO4 MYEF2 MYEF2 MCM4 MCM4 TP53 TP53 LOC108516807 LOC108516807 FBH1 FBH1 CDC45 CDC45 SWSAP1 SWSAP1 MCM6 MCM6 TERF2 TERF2 PCBP2 PCBP2 NABP2 NABP2 RTF1 RTF1 NUP35 NUP35 SMC5 SMC5 RAD23A RAD23A ENSRBIP00000031803 ENSRBIP00000031803 RAD51 RAD51 MMS22L MMS22L SPRTN SPRTN STN1 STN1 ZRANB3 ZRANB3 SETMAR SETMAR ERCC4 ERCC4 LRPPRC LRPPRC SMC4 SMC4 HNRNPU HNRNPU HNRNPDL HNRNPDL MEIOB MEIOB LOC108529358 LOC108529358 BLM BLM SMARCAL1 SMARCAL1 POT1 POT1 MCM10 MCM10 LONP1 LONP1 RPA3 RPA3 DDX11 DDX11 TSN TSN DHX9 DHX9 RAD51AP2 RAD51AP2 ENSRBIP00000035711 ENSRBIP00000035711 FUBP3 FUBP3 NOL12 NOL12 CTC1 CTC1 SSBP3 SSBP3 TWNK TWNK TERF1 TERF1 FUBP1 FUBP1 RAD54L RAD54L DMC1 DMC1 HMCES HMCES ERCC1 ERCC1 ENSRBIP00000011440 ENSRBIP00000011440 SSBP2 SSBP2 RAD18 RAD18 IGHMBP2 IGHMBP2 HSF1 HSF1 RBMS1 RBMS1 DHX36 DHX36 RAD23B RAD23B RBBP8 RBBP8 TOP3A TOP3A TOP1 TOP1 SSBP1 SSBP1 ENSRBIP00000008618 ENSRBIP00000008618 XPC XPC MCM9 MCM9 RAD52 RAD52 LOC108525285 LOC108525285
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC108521487BIVM-ERCC5 readthrough. (1654 aa)
NEIL3Nei like DNA glycosylase 3. (594 aa)
SSBP4Single stranded DNA binding protein 4. (381 aa)
ENSRBIP00000004884Uncharacterized protein. (162 aa)
PURBPurine rich element binding protein B. (312 aa)
NABP1Nucleic acid binding protein 1. (204 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoprotein A2/B1. (353 aa)
FAM111AFamily with sequence similarity 111 member A. (611 aa)
CRY2Cryptochrome circadian regulator 2. (613 aa)
TEN1Uncharacterized protein. (123 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
SMC2Structural maintenance of chromosomes protein. (1197 aa)
ENSRBIP00000000804RPA_C domain-containing protein. (235 aa)
BRCA2Uncharacterized protein. (386 aa)
SAMHD1SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1. (628 aa)
NUCKS1Nuclear casein kinase and cyclin dependent kinase substrate 1. (232 aa)
SMC6Structural maintenance of chromosomes 6. (1040 aa)
POLR2HRNA polymerase II subunit H. (174 aa)
LOC108537870Uncharacterized protein. (322 aa)
TDP1Tyrosyl-DNA phosphodiesterase 1. (573 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (719 aa)
TERF2IPTERF2 interacting protein. (400 aa)
RNF138Ring finger protein 138. (216 aa)
WDR48WD repeat domain 48. (644 aa)
SHOC1Shortage in chiasmata 1. (1381 aa)
ENSRBIP00000019027Uncharacterized protein. (312 aa)
RECQL4RecQ like helicase 4. (1197 aa)
WBP11Uncharacterized protein. (637 aa)
POU4F1POU domain protein. (424 aa)
MCM2DNA helicase; Belongs to the MCM family. (907 aa)
ENSRBIP00000021679Uncharacterized protein. (269 aa)
RECQLATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (649 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (534 aa)
MCM5DNA helicase; Belongs to the MCM family. (734 aa)
YBX1CSD_1 domain-containing protein. (282 aa)
RAD51BRAD51 paralog B. (426 aa)
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (752 aa)
RPA2Replication protein A2. (273 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
TDP2Tyrosyl-DNA phosphodiesterase 2. (358 aa)
HROBChromosome 17 open reading frame 53. (437 aa)
REXO4REX4 homolog, 3'-5' exonuclease. (422 aa)
MYEF2Myelin expression factor 2. (600 aa)
MCM4DNA helicase; Belongs to the MCM family. (863 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (393 aa)
LOC108516807Uncharacterized protein. (564 aa)
FBH1F-box DNA helicase 1. (1079 aa)
CDC45Cell division cycle 45. (552 aa)
SWSAP1SWIM-type zinc finger 7 associated protein 1. (250 aa)
MCM6DNA helicase; Belongs to the MCM family. (821 aa)
TERF2Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (421 aa)
PCBP2Poly(rC) binding protein 2. (366 aa)
NABP2Nucleic acid binding protein 2. (211 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (687 aa)
NUP35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (326 aa)
SMC5Structural maintenance of chromosomes 5. (1054 aa)
RAD23ARAD23 homolog A, nucleotide excision repair protein. (363 aa)
ENSRBIP00000031803RRM domain-containing protein. (287 aa)
RAD51DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (337 aa)
MMS22LMMS22 like, DNA repair protein. (1243 aa)
SPRTNSprT-like N-terminal domain. (488 aa)
STN1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (368 aa)
ZRANB3Zinc finger RANBP2-type containing 3. (998 aa)
SETMARSET domain and mariner transposase fusion gene. (684 aa)
ERCC4ERCC excision repair 4, endonuclease catalytic subunit. (907 aa)
LRPPRCPPR_long domain-containing protein. (1401 aa)
SMC4Structural maintenance of chromosomes protein. (1253 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U. (793 aa)
HNRNPDLHeterogeneous nuclear ribonucleoprotein D like. (428 aa)
MEIOBMeiosis specific with OB-fold. (449 aa)
LOC108529358CSD_1 domain-containing protein. (284 aa)
BLMBLM RecQ like helicase. (1396 aa)
SMARCAL1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (959 aa)
POT1Protection of telomeres 1. (633 aa)
MCM10Minichromosome maintenance 10 replication initiation factor. (904 aa)
LONP1Lon protease homolog, mitochondrial; ATP-dependent serine protease that mediates the selective degradation of misfolded, unassembled or oxidatively damaged polypeptides as well as certain short-lived regulatory proteins in the mitochondrial matrix. May also have a chaperone function in the assembly of inner membrane protein complexes. Participates in the regulation of mitochondrial gene expression and in the maintenance of the integrity of the mitochondrial genome. Binds to mitochondrial promoters and RNA in a single-stranded, site-specific, and strand- specific manner. May regulate mi [...] (1019 aa)
RPA3Replication protein A3. (121 aa)
DDX11DEAD/H-box helicase 11. (906 aa)
TSNTranslin. (228 aa)
DHX9DExH-box helicase 9. (1275 aa)
RAD51AP2RAD51 associated protein 2. (1159 aa)
ENSRBIP00000035711RAD51_interact domain-containing protein. (282 aa)
FUBP3Uncharacterized protein. (572 aa)
NOL12Uncharacterized protein. (213 aa)
CTC1CST telomere replication complex component 1. (1217 aa)
SSBP3Single stranded DNA binding protein 3. (369 aa)
TWNKTwinkle mtDNA helicase. (684 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (406 aa)
FUBP1Far upstream element binding protein 1. (666 aa)
RAD54LRAD54 like. (747 aa)
DMC1Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily. (376 aa)
HMCESAbasic site processing protein HMCES; Sensor of abasic sites in single-stranded DNA (ssDNA) required to preserve genome integrity by promoting error-free repair of abasic sites. Acts as an enzyme that recognizes and binds abasic sites in ssDNA at replication forks and chemically modifies the lesion by forming a covalent cross-link with DNA. The HMCES DNA-protein cross- link is then degraded by the proteasome. Promotes error-free repair of abasic sites by acting as a 'suicide' enzyme that is degraded, thereby protecting abasic sites from translesion synthesis (TLS) polymerases and endon [...] (354 aa)
ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit. (289 aa)
ENSRBIP00000011440HELICc2 domain-containing protein. (117 aa)
SSBP2Single stranded DNA binding protein 2. (357 aa)
RAD18RAD18 E3 ubiquitin protein ligase. (494 aa)
IGHMBP2Immunoglobulin mu DNA binding protein 2. (985 aa)
HSF1Heat shock transcription factor 1. (489 aa)
RBMS1RNA binding motif single stranded interacting protein 1. (422 aa)
DHX36DEAH-box helicase 36. (971 aa)
RAD23BRAD23 homolog B, nucleotide excision repair protein. (375 aa)
RBBP8RB binding protein 8, endonuclease. (898 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (1001 aa)
TOP1DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] (766 aa)
SSBP1Single stranded DNA binding protein 1. (148 aa)
ENSRBIP00000008618Uncharacterized protein. (361 aa)
XPCXPC complex subunit, DNA damage recognition and repair factor. (939 aa)
MCM9Minichromosome maintenance 9 homologous recombination repair factor; Belongs to the MCM family. (1140 aa)
RAD52RAD52 homolog, DNA repair protein. (419 aa)
LOC108525285Uncharacterized protein. (274 aa)
Your Current Organism:
Rhinopithecus bieti
NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey
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