STRINGSTRING
NEIL2 NEIL2 WRN WRN POLD1 POLD1 HUWE1 HUWE1 POLL POLL POLE POLE ERCC6 ERCC6 APEX2 APEX2 RPA1 RPA1 XPA XPA APEX1 APEX1 HMGA2 HMGA2 LOC108523445 LOC108523445 UNG UNG RPA3 RPA3 XRCC1 XRCC1 POLB POLB POLG POLG DNA2 DNA2 PARP2 PARP2 LIG1 LIG1 NTHL1 NTHL1 MPG MPG ADPRHL2 ADPRHL2 NEIL1 NEIL1 PRMT6 PRMT6 FEN1 FEN1 PNKP PNKP NEIL3 NEIL3 POLQ POLQ OGG1 OGG1 PCNA PCNA MUTYH MUTYH MBD4 MBD4 USP47 USP47 LIG3 LIG3 SIRT6 SIRT6 SMUG1 SMUG1 PARG PARG HMGA1 HMGA1 ENSRBIP00000013303 ENSRBIP00000013303 ENSRBIP00000013617 ENSRBIP00000013617 TDG TDG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NEIL2Nei like DNA glycosylase 2. (332 aa)
WRNWRN RecQ like helicase. (1394 aa)
POLD1DNA polymerase. (1124 aa)
HUWE1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1. (4151 aa)
POLLDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (575 aa)
POLEDNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2253 aa)
ERCC6ERCC excision repair 6, chromatin remodeling factor. (1484 aa)
APEX2DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (518 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
XPAXPA, DNA damage recognition and repair factor. (303 aa)
APEX1DNA-(apurinic or apyrimidinic site) lyase; Initiates repair of AP sites in DNA by catalyzing hydrolytic incision of the phosphodiester backbone immediately adjacent to the damage, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends. (322 aa)
HMGA2High mobility group AT-hook 2. (147 aa)
LOC108523445Uncharacterized protein. (106 aa)
UNGUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Belongs to the uracil-DNA glycosylase (UDG) superfamily. UNG family. (345 aa)
RPA3Replication protein A3. (121 aa)
XRCC1X-ray repair cross complementing 1. (633 aa)
POLBDNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity. (335 aa)
POLGDNA polymerase gamma, catalytic subunit. (1234 aa)
DNA2DNA replication helicase/nuclease 2. (1047 aa)
PARP2Poly [ADP-ribose] polymerase. (570 aa)
LIG1DNA ligase. (928 aa)
NTHL1Endonuclease III-like protein 1; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (312 aa)
MPGN-methylpurine DNA glycosylase. (284 aa)
ADPRHL2ADP-ribosylhydrolase like 2. (364 aa)
NEIL1Nei like DNA glycosylase 1. (390 aa)
PRMT6Protein arginine methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (375 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
PNKPPolynucleotide kinase 3'-phosphatase. (521 aa)
NEIL3Nei like DNA glycosylase 3. (594 aa)
POLQDNA polymerase theta. (2717 aa)
OGG18-oxoguanine DNA glycosylase. (391 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
MUTYHAdenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (536 aa)
MBD4Methyl-CpG-binding domain protein 4; Mismatch-specific DNA N-glycosylase involved in DNA repair. Has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites. Can also remove uracil or 5-fluorouracil in G:U mismatches. Has no lyase activity. Was first identified as methyl-CpG-binding protein. (572 aa)
USP47Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1375 aa)
LIG3DNA ligase. (950 aa)
SIRT6Sirtuin 6. (355 aa)
SMUG1Single-strand-selective monofunctional uracil-DNA glycosylase 1. (270 aa)
PARGPoly(ADP-ribose) glycohydrolase. (975 aa)
HMGA1Uncharacterized protein. (201 aa)
ENSRBIP00000013303Uncharacterized protein. (138 aa)
ENSRBIP00000013617Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (245 aa)
TDGThymine DNA glycosylase. (397 aa)
Your Current Organism:
Rhinopithecus bieti
NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey
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