42 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NUDT16	Nudix hydrolase 16. (212 aa)
	ENSRBIP00000002177	Bms1-type G domain-containing protein. (174 aa)
	NHP2	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
	GAR1	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (217 aa)
	UTP6	UTP6 small subunit processome component. (598 aa)
	LOC108517067	Uncharacterized protein. (64 aa)
	SNU13	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (132 aa)
	IMP3	IMP U3 small nucleolar ribonucleoprotein 3. (184 aa)
	ENSRBIP00000005985	Uncharacterized protein. (64 aa)
	DKC1	Dyskerin pseudouridine synthase 1. (597 aa)
	RRP9	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. (474 aa)
	ENSRBIP00000010054	Uncharacterized protein. (216 aa)
	NUFIP1	Nuclear FMR1 interacting protein 1. (494 aa)
	BYSL	Bystin like. (437 aa)
	NUDT7	Nudix hydrolase 7. (238 aa)
	NOP56	NOP56 ribonucleoprotein. (517 aa)
	PRKDC	Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family. (4128 aa)
	NUDT5	Nudix hydrolase 5; Belongs to the Nudix hydrolase family. (232 aa)
	NOLC1	Nucleolar and coiled-body phosphoprotein 1. (736 aa)
	XRCC5	X-ray repair cross complementing 5. (805 aa)
	TBL3	Transducin beta like 3. (795 aa)
	UTP25	UTP25 small subunit processor component. (756 aa)
	FAM155A	Family with sequence similarity 155 member A. (457 aa)
	BMS1	DUF663 domain-containing protein. (428 aa)
	ENSRBIP00000023231	Uncharacterized protein. (192 aa)
	ENSRBIP00000023898	Uncharacterized protein. (726 aa)
	FAM155B	Family with sequence similarity 155 member B. (362 aa)
	ENSRBIP00000029691	Uncharacterized protein. (187 aa)
	WDR3	WD repeat domain 3. (972 aa)
	NUDT1	Nudix hydrolase 1; Belongs to the Nudix hydrolase family. (146 aa)
	TSR1	TSR1 ribosome maturation factor. (805 aa)
	HEATR1	HEAT repeat containing 1. (2142 aa)
	NUDT16L1	Nudix hydrolase 16 like 1. (192 aa)
	NUDT4	Nudix hydrolase domain-containing protein. (181 aa)
	NOP14	NOP14 nucleolar protein. (857 aa)
	ISG20	Interferon stimulated exonuclease gene 20. (181 aa)
	ENSRBIP00000037689	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (191 aa)
	DHX37	DEAH-box helicase 37. (1177 aa)
	DDX21	Uncharacterized protein. (783 aa)
	ENSRBIP00000040718	Uncharacterized protein. (151 aa)
	NOP58	NOP58 ribonucleoprotein. (472 aa)
	NOLC1-2	LisH domain-containing protein. (82 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMS1	BYSL	ENSRBIP00000022563	ENSRBIP00000012449	DUF663 domain-containing protein.	Bystin like.	0.957
BMS1	DHX37	ENSRBIP00000022563	ENSRBIP00000040039	DUF663 domain-containing protein.	DEAH-box helicase 37.	0.616
BMS1	DKC1	ENSRBIP00000022563	ENSRBIP00000009183	DUF663 domain-containing protein.	Dyskerin pseudouridine synthase 1.	0.557
BMS1	ENSRBIP00000002177	ENSRBIP00000022563	ENSRBIP00000002177	DUF663 domain-containing protein.	Bms1-type G domain-containing protein.	0.940
BMS1	ENSRBIP00000010054	ENSRBIP00000022563	ENSRBIP00000010054	DUF663 domain-containing protein.	Uncharacterized protein.	0.841
BMS1	ENSRBIP00000023231	ENSRBIP00000022563	ENSRBIP00000023231	DUF663 domain-containing protein.	Uncharacterized protein.	0.938
BMS1	ENSRBIP00000029691	ENSRBIP00000022563	ENSRBIP00000029691	DUF663 domain-containing protein.	Uncharacterized protein.	0.940
BMS1	ENSRBIP00000040718	ENSRBIP00000022563	ENSRBIP00000040718	DUF663 domain-containing protein.	Uncharacterized protein.	0.820
BMS1	HEATR1	ENSRBIP00000022563	ENSRBIP00000032502	DUF663 domain-containing protein.	HEAT repeat containing 1.	0.965
BMS1	IMP3	ENSRBIP00000022563	ENSRBIP00000005577	DUF663 domain-containing protein.	IMP U3 small nucleolar ribonucleoprotein 3.	0.879
BMS1	NHP2	ENSRBIP00000022563	ENSRBIP00000003950	DUF663 domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.544
BMS1	NOP14	ENSRBIP00000022563	ENSRBIP00000035171	DUF663 domain-containing protein.	NOP14 nucleolar protein.	0.959
BMS1	NOP56	ENSRBIP00000022563	ENSRBIP00000013371	DUF663 domain-containing protein.	NOP56 ribonucleoprotein.	0.841
BMS1	NOP58	ENSRBIP00000022563	ENSRBIP00000041105	DUF663 domain-containing protein.	NOP58 ribonucleoprotein.	0.928
BMS1	RRP9	ENSRBIP00000022563	ENSRBIP00000009335	DUF663 domain-containing protein.	Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.	0.910
BMS1	SNU13	ENSRBIP00000022563	ENSRBIP00000005466	DUF663 domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.845
BMS1	TBL3	ENSRBIP00000022563	ENSRBIP00000017970	DUF663 domain-containing protein.	Transducin beta like 3.	0.946
BMS1	TSR1	ENSRBIP00000022563	ENSRBIP00000032416	DUF663 domain-containing protein.	TSR1 ribosome maturation factor.	0.808
BMS1	UTP25	ENSRBIP00000022563	ENSRBIP00000018400	DUF663 domain-containing protein.	UTP25 small subunit processor component.	0.480
BMS1	UTP6	ENSRBIP00000022563	ENSRBIP00000004591	DUF663 domain-containing protein.	UTP6 small subunit processome component.	0.820