27 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CD44	CD44 molecule (Indian blood group). (742 aa)
	ENSRBIP00000022096	WH1 domain-containing protein. (376 aa)
	PLXND1	Plexin D1. (1884 aa)
	CSPG4	Chondroitin sulfate proteoglycan 4. (1323 aa)
	APC2	APC regulator of WNT signaling pathway 2. (2255 aa)
	ENSRBIP00000026615	Uncharacterized protein. (185 aa)
	SLC39A6	Solute carrier family 39 member 6. (738 aa)
	FAP	Fibroblast activation protein alpha; Belongs to the peptidase S9B family. (760 aa)
	FERMT2	Fermitin family member 2. (693 aa)
	NCKAP1	NCK associated protein 1. (1112 aa)
	ENSRBIP00000000419	Uncharacterized protein. (191 aa)
	ENSRBIP00000000670	WH1 domain-containing protein. (372 aa)
	SYNE2	Spectrin repeat containing nuclear envelope protein 2. (6780 aa)
	CFL1	Cofilin 1; Belongs to the actin-binding proteins ADF family. (189 aa)
	ITGB3	Integrin beta; Belongs to the integrin beta chain family. (788 aa)
	PDPN	Podoplanin. (234 aa)
	DOCK8	Dedicator of cytokinesis 8; Belongs to the DOCK family. (2084 aa)
	ENSRBIP00000015347	Uncharacterized protein. (182 aa)
	PLEK2	Pleckstrin 2. (353 aa)
	ITGAV	Integrin subunit alpha V; Belongs to the integrin alpha chain family. (1048 aa)
	ENSRBIP00000018225	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (125 aa)
	EPHA2	EPH receptor A2. (1036 aa)
	PIEZO1	Piezo-type mechanosensitive ion channel component. (2423 aa)
	ANTXR1	Anthrax toxin receptor; Belongs to the ATR family. (564 aa)
	DPP4	Dipeptidyl peptidase 4; Belongs to the peptidase S9B family. (767 aa)
	ENSRBIP00000037737	annotation not available (191 aa)
	CDC42	Uncharacterized protein. (191 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD44	CDC42	ENSRBIP00000022264	ENSRBIP00000037478	CD44 molecule (Indian blood group).	Uncharacterized protein.	0.932
CD44	ITGAV	ENSRBIP00000022264	ENSRBIP00000017764	CD44 molecule (Indian blood group).	Integrin subunit alpha V; Belongs to the integrin alpha chain family.	0.526
CD44	ITGB3	ENSRBIP00000022264	ENSRBIP00000008880	CD44 molecule (Indian blood group).	Integrin beta; Belongs to the integrin beta chain family.	0.488
CDC42	CD44	ENSRBIP00000037478	ENSRBIP00000022264	Uncharacterized protein.	CD44 molecule (Indian blood group).	0.932
CDC42	DOCK8	ENSRBIP00000037478	ENSRBIP00000014484	Uncharacterized protein.	Dedicator of cytokinesis 8; Belongs to the DOCK family.	0.746
CDC42	NCKAP1	ENSRBIP00000037478	ENSRBIP00000034707	Uncharacterized protein.	NCK associated protein 1.	0.454
CFL1	ENSRBIP00000000670	ENSRBIP00000002688	ENSRBIP00000000670	Cofilin 1; Belongs to the actin-binding proteins ADF family.	WH1 domain-containing protein.	0.420
CFL1	ENSRBIP00000022096	ENSRBIP00000002688	ENSRBIP00000022096	Cofilin 1; Belongs to the actin-binding proteins ADF family.	WH1 domain-containing protein.	0.420
DOCK8	CDC42	ENSRBIP00000014484	ENSRBIP00000037478	Dedicator of cytokinesis 8; Belongs to the DOCK family.	Uncharacterized protein.	0.746
DOCK8	ENSRBIP00000000419	ENSRBIP00000014484	ENSRBIP00000000419	Dedicator of cytokinesis 8; Belongs to the DOCK family.	Uncharacterized protein.	0.746
DOCK8	ENSRBIP00000015347	ENSRBIP00000014484	ENSRBIP00000015347	Dedicator of cytokinesis 8; Belongs to the DOCK family.	Uncharacterized protein.	0.746
DOCK8	ENSRBIP00000026615	ENSRBIP00000014484	ENSRBIP00000026615	Dedicator of cytokinesis 8; Belongs to the DOCK family.	Uncharacterized protein.	0.746
DOCK8	ENSRBIP00000037737	ENSRBIP00000014484	ENSRBIP00000037737	Dedicator of cytokinesis 8; Belongs to the DOCK family.	annotation not available	0.746
DPP4	FAP	ENSRBIP00000041109	ENSRBIP00000028301	Dipeptidyl peptidase 4; Belongs to the peptidase S9B family.	Fibroblast activation protein alpha; Belongs to the peptidase S9B family.	0.756
ENSRBIP00000000419	DOCK8	ENSRBIP00000000419	ENSRBIP00000014484	Uncharacterized protein.	Dedicator of cytokinesis 8; Belongs to the DOCK family.	0.746
ENSRBIP00000000419	NCKAP1	ENSRBIP00000000419	ENSRBIP00000034707	Uncharacterized protein.	NCK associated protein 1.	0.454
ENSRBIP00000000670	CFL1	ENSRBIP00000000670	ENSRBIP00000002688	WH1 domain-containing protein.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.420
ENSRBIP00000015347	DOCK8	ENSRBIP00000015347	ENSRBIP00000014484	Uncharacterized protein.	Dedicator of cytokinesis 8; Belongs to the DOCK family.	0.746
ENSRBIP00000015347	NCKAP1	ENSRBIP00000015347	ENSRBIP00000034707	Uncharacterized protein.	NCK associated protein 1.	0.454
ENSRBIP00000022096	CFL1	ENSRBIP00000022096	ENSRBIP00000002688	WH1 domain-containing protein.	Cofilin 1; Belongs to the actin-binding proteins ADF family.	0.420