(8 nodes) Paraxial mesoderm formation network (Rhinopithecus bieti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	WNT3A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (352 aa)
	LEF1	Lymphoid enhancer binding factor 1. (398 aa)
	LOC108537538	Sec8_exocyst domain-containing protein. (474 aa)
	EXOC4	Uncharacterized protein. (383 aa)
	HNF1A	HNF1 homeobox A. (662 aa)
	LOC108520322	Fork-head domain-containing protein. (198 aa)
	WNT11	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (374 aa)
	WNT5A	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (380 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EXOC4	LOC108537538	ENSRBIP00000013131	ENSRBIP00000012295	Uncharacterized protein.	Sec8_exocyst domain-containing protein.	0.924
LEF1	WNT11	ENSRBIP00000009456	ENSRBIP00000038642	Lymphoid enhancer binding factor 1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.416
LEF1	WNT3A	ENSRBIP00000009456	ENSRBIP00000032160	Lymphoid enhancer binding factor 1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.526
LEF1	WNT5A	ENSRBIP00000009456	ENSRBIP00000041095	Lymphoid enhancer binding factor 1.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.454
LOC108537538	EXOC4	ENSRBIP00000012295	ENSRBIP00000013131	Sec8_exocyst domain-containing protein.	Uncharacterized protein.	0.924
WNT11	LEF1	ENSRBIP00000038642	ENSRBIP00000009456	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Lymphoid enhancer binding factor 1.	0.416
WNT11	WNT3A	ENSRBIP00000038642	ENSRBIP00000032160	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.573
WNT11	WNT5A	ENSRBIP00000038642	ENSRBIP00000041095	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.504
WNT3A	LEF1	ENSRBIP00000032160	ENSRBIP00000009456	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Lymphoid enhancer binding factor 1.	0.526
WNT3A	WNT11	ENSRBIP00000032160	ENSRBIP00000038642	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.573
WNT5A	LEF1	ENSRBIP00000041095	ENSRBIP00000009456	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Lymphoid enhancer binding factor 1.	0.454
WNT5A	WNT11	ENSRBIP00000041095	ENSRBIP00000038642	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.	0.504