21 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FUT7	Fucosyltransferase 7. (342 aa)
	ETS1	ETS proto-oncogene 1, transcription factor. (485 aa)
	CHST2	Sulfotransferase; Belongs to the sulfotransferase 1 family. (530 aa)
	ENSRBIP00000006958	TNF receptor-associated factor. (473 aa)
	ITGB2	Integrin beta. (779 aa)
	ALOX5	Arachidonate 5-lipoxygenase. (674 aa)
	RELA	Uncharacterized protein. (282 aa)
	NFAT5	Nuclear factor of activated T cells 5. (1442 aa)
	MDK	Uncharacterized protein. (143 aa)
	GP1BA	Glycoprotein Ib platelet subunit alpha. (599 aa)
	ENSRBIP00000021702	Uncharacterized protein. (144 aa)
	ELANE	Elastase, neutrophil expressed; Belongs to the peptidase S1 family. (265 aa)
	IRAK1	Interleukin 1 receptor associated kinase 1. (702 aa)
	SELE	Selectin E. (610 aa)
	ITGA4	Integrin subunit alpha 4; Belongs to the integrin alpha chain family. (1032 aa)
	ENSRBIP00000033881	Uncharacterized protein. (61 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (522 aa)
	ENSRBIP00000038500	RHD domain-containing protein. (112 aa)
	ST3GAL4	ST3 beta-galactoside alpha-2,3-sialyltransferase 4; Belongs to the glycosyltransferase 29 family. (333 aa)
	IL6	Interleukin 6. (214 aa)
	SELP	Selectin P. (829 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSRBIP00000006958	ENSRBIP00000038500	ENSRBIP00000006958	ENSRBIP00000038500	TNF receptor-associated factor.	RHD domain-containing protein.	0.407
ENSRBIP00000006958	IL6	ENSRBIP00000006958	ENSRBIP00000041408	TNF receptor-associated factor.	Interleukin 6.	0.414
ENSRBIP00000006958	IRAK1	ENSRBIP00000006958	ENSRBIP00000026395	TNF receptor-associated factor.	Interleukin 1 receptor associated kinase 1.	0.971
ENSRBIP00000006958	RELA	ENSRBIP00000006958	ENSRBIP00000018109	TNF receptor-associated factor.	Uncharacterized protein.	0.407
ENSRBIP00000038500	ENSRBIP00000006958	ENSRBIP00000038500	ENSRBIP00000006958	RHD domain-containing protein.	TNF receptor-associated factor.	0.407
ENSRBIP00000038500	IL6	ENSRBIP00000038500	ENSRBIP00000041408	RHD domain-containing protein.	Interleukin 6.	0.452
ENSRBIP00000038500	IRAK1	ENSRBIP00000038500	ENSRBIP00000026395	RHD domain-containing protein.	Interleukin 1 receptor associated kinase 1.	0.478
ENSRBIP00000038500	RELA	ENSRBIP00000038500	ENSRBIP00000018109	RHD domain-containing protein.	Uncharacterized protein.	0.869
ENSRBIP00000038500	TRAF6	ENSRBIP00000038500	ENSRBIP00000036224	RHD domain-containing protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.407
FUT7	SELE	ENSRBIP00000007095	ENSRBIP00000032926	Fucosyltransferase 7.	Selectin E.	0.557
FUT7	SELP	ENSRBIP00000007095	ENSRBIP00000042014	Fucosyltransferase 7.	Selectin P.	0.560
GP1BA	ITGB2	ENSRBIP00000019644	ENSRBIP00000014350	Glycoprotein Ib platelet subunit alpha.	Integrin beta.	0.678
GP1BA	SELE	ENSRBIP00000019644	ENSRBIP00000032926	Glycoprotein Ib platelet subunit alpha.	Selectin E.	0.471
GP1BA	SELP	ENSRBIP00000019644	ENSRBIP00000042014	Glycoprotein Ib platelet subunit alpha.	Selectin P.	0.755
IL6	ENSRBIP00000006958	ENSRBIP00000041408	ENSRBIP00000006958	Interleukin 6.	TNF receptor-associated factor.	0.414
IL6	ENSRBIP00000038500	ENSRBIP00000041408	ENSRBIP00000038500	Interleukin 6.	RHD domain-containing protein.	0.452
IL6	IRAK1	ENSRBIP00000041408	ENSRBIP00000026395	Interleukin 6.	Interleukin 1 receptor associated kinase 1.	0.435
IL6	RELA	ENSRBIP00000041408	ENSRBIP00000018109	Interleukin 6.	Uncharacterized protein.	0.942
IL6	SELE	ENSRBIP00000041408	ENSRBIP00000032926	Interleukin 6.	Selectin E.	0.562
IL6	SELP	ENSRBIP00000041408	ENSRBIP00000042014	Interleukin 6.	Selectin P.	0.501