17 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F3	Coagulation factor III, tissue factor. (296 aa)
	FCN3	Ficolin 3. (320 aa)
	PROC	Protein C, inactivator of coagulation factors Va and VIIIa; Belongs to the peptidase S1 family. (476 aa)
	HTRA2	HtrA serine peptidase 2. (458 aa)
	FCN2	Ficolin 2. (328 aa)
	MBL2	Mannose binding lectin 2. (247 aa)
	F11	Coagulation factor XI; Belongs to the peptidase S1 family. (625 aa)
	CFH	Uncharacterized protein. (1187 aa)
	MASP1	Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family. (739 aa)
	COLEC10	Collectin subfamily member 10. (276 aa)
	F10	Coagulation factor X. (434 aa)
	F5	Coagulation factor V; Belongs to the multicopper oxidase family. (2195 aa)
	F12	Coagulation factor XII. (615 aa)
	C3	Complement C3. (1598 aa)
	ENSRBIP00000007889	Fibrinogen C-terminal domain-containing protein. (317 aa)
	MASP2	Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family. (686 aa)
	PLAU	Plasminogen activator, urokinase. (431 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C3	CFH	ENSRBIP00000008123	ENSRBIP00000016615	Complement C3.	Uncharacterized protein.	0.998
C3	FCN3	ENSRBIP00000008123	ENSRBIP00000038158	Complement C3.	Ficolin 3.	0.453
C3	MASP1	ENSRBIP00000008123	ENSRBIP00000014730	Complement C3.	Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.	0.756
C3	MASP2	ENSRBIP00000008123	ENSRBIP00000007222	Complement C3.	Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.	0.854
C3	MBL2	ENSRBIP00000008123	ENSRBIP00000019785	Complement C3.	Mannose binding lectin 2.	0.591
CFH	C3	ENSRBIP00000016615	ENSRBIP00000008123	Uncharacterized protein.	Complement C3.	0.998
CFH	MBL2	ENSRBIP00000016615	ENSRBIP00000019785	Uncharacterized protein.	Mannose binding lectin 2.	0.438
COLEC10	ENSRBIP00000007889	ENSRBIP00000014113	ENSRBIP00000007889	Collectin subfamily member 10.	Fibrinogen C-terminal domain-containing protein.	0.527
COLEC10	FCN2	ENSRBIP00000014113	ENSRBIP00000020374	Collectin subfamily member 10.	Ficolin 2.	0.527
COLEC10	FCN3	ENSRBIP00000014113	ENSRBIP00000038158	Collectin subfamily member 10.	Ficolin 3.	0.678
COLEC10	MASP1	ENSRBIP00000014113	ENSRBIP00000014730	Collectin subfamily member 10.	Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.	0.661
COLEC10	MASP2	ENSRBIP00000014113	ENSRBIP00000007222	Collectin subfamily member 10.	Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.	0.732
COLEC10	MBL2	ENSRBIP00000014113	ENSRBIP00000019785	Collectin subfamily member 10.	Mannose binding lectin 2.	0.440
ENSRBIP00000007889	COLEC10	ENSRBIP00000007889	ENSRBIP00000014113	Fibrinogen C-terminal domain-containing protein.	Collectin subfamily member 10.	0.527
ENSRBIP00000007889	MASP1	ENSRBIP00000007889	ENSRBIP00000014730	Fibrinogen C-terminal domain-containing protein.	Mannan binding lectin serine peptidase 1; Belongs to the peptidase S1 family.	0.750
ENSRBIP00000007889	MASP2	ENSRBIP00000007889	ENSRBIP00000007222	Fibrinogen C-terminal domain-containing protein.	Mannan binding lectin serine peptidase 2; Belongs to the peptidase S1 family.	0.678
ENSRBIP00000007889	MBL2	ENSRBIP00000007889	ENSRBIP00000019785	Fibrinogen C-terminal domain-containing protein.	Mannose binding lectin 2.	0.495
F10	F12	ENSRBIP00000013570	ENSRBIP00000009365	Coagulation factor X.	Coagulation factor XII.	0.428
F10	F3	ENSRBIP00000013570	ENSRBIP00000002243	Coagulation factor X.	Coagulation factor III, tissue factor.	0.918
F10	F5	ENSRBIP00000013570	ENSRBIP00000011547	Coagulation factor X.	Coagulation factor V; Belongs to the multicopper oxidase family.	0.958