(8 nodes) Elongin complex network (Rhinopithecus bieti)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSRBIP00000001156	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (115 aa)
	EPOP	Elongin BC and polycomb repressive complex 2 associated protein. (343 aa)
	ELOC	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
	LOC108519035	TFIIS N-terminal domain-containing protein. (527 aa)
	ENSRBIP00000011745	Uncharacterized protein. (55 aa)
	ENSRBIP00000004787	Skp1_POZ domain-containing protein. (66 aa)
	ELOA	Elongin A. (800 aa)
	ELOA2	TFIIS N-terminal domain-containing protein. (755 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELOA	ELOA2	ENSRBIP00000002297	ENSRBIP00000001356	Elongin A.	TFIIS N-terminal domain-containing protein.	0.442
ELOA	ELOC	ENSRBIP00000002297	ENSRBIP00000029776	Elongin A.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.805
ELOA	ENSRBIP00000001156	ENSRBIP00000002297	ENSRBIP00000001156	Elongin A.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.805
ELOA	ENSRBIP00000004787	ENSRBIP00000002297	ENSRBIP00000004787	Elongin A.	Skp1_POZ domain-containing protein.	0.805
ELOA	EPOP	ENSRBIP00000002297	ENSRBIP00000035898	Elongin A.	Elongin BC and polycomb repressive complex 2 associated protein.	0.528
ELOA	LOC108519035	ENSRBIP00000002297	ENSRBIP00000019439	Elongin A.	TFIIS N-terminal domain-containing protein.	0.445
ELOA2	ELOA	ENSRBIP00000001356	ENSRBIP00000002297	TFIIS N-terminal domain-containing protein.	Elongin A.	0.442
ELOA2	ELOC	ENSRBIP00000001356	ENSRBIP00000029776	TFIIS N-terminal domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.775
ELOA2	ENSRBIP00000001156	ENSRBIP00000001356	ENSRBIP00000001156	TFIIS N-terminal domain-containing protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.775
ELOA2	ENSRBIP00000004787	ENSRBIP00000001356	ENSRBIP00000004787	TFIIS N-terminal domain-containing protein.	Skp1_POZ domain-containing protein.	0.775
ELOA2	EPOP	ENSRBIP00000001356	ENSRBIP00000035898	TFIIS N-terminal domain-containing protein.	Elongin BC and polycomb repressive complex 2 associated protein.	0.461
ELOC	ELOA	ENSRBIP00000029776	ENSRBIP00000002297	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Elongin A.	0.805
ELOC	ELOA2	ENSRBIP00000029776	ENSRBIP00000001356	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	TFIIS N-terminal domain-containing protein.	0.775
ELOC	LOC108519035	ENSRBIP00000029776	ENSRBIP00000019439	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	TFIIS N-terminal domain-containing protein.	0.804
ENSRBIP00000001156	ELOA	ENSRBIP00000001156	ENSRBIP00000002297	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Elongin A.	0.805
ENSRBIP00000001156	ELOA2	ENSRBIP00000001156	ENSRBIP00000001356	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	TFIIS N-terminal domain-containing protein.	0.775
ENSRBIP00000001156	LOC108519035	ENSRBIP00000001156	ENSRBIP00000019439	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	TFIIS N-terminal domain-containing protein.	0.804
ENSRBIP00000004787	ELOA	ENSRBIP00000004787	ENSRBIP00000002297	Skp1_POZ domain-containing protein.	Elongin A.	0.805
ENSRBIP00000004787	ELOA2	ENSRBIP00000004787	ENSRBIP00000001356	Skp1_POZ domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.775
ENSRBIP00000004787	LOC108519035	ENSRBIP00000004787	ENSRBIP00000019439	Skp1_POZ domain-containing protein.	TFIIS N-terminal domain-containing protein.	0.804