39 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	ENSRBIP00000001317	Ubiquitin-like domain-containing protein. (155 aa)
	NOD2	Nucleotide binding oligomerization domain containing 2. (1153 aa)
	ENSRBIP00000003802	Ubiquitin-like domain-containing protein. (84 aa)
	RIPK2	Receptor interacting serine/threonine kinase 2. (443 aa)
	ENSRBIP00000004187	Ubiquitin-like domain-containing protein. (153 aa)
	ENSRBIP00000004747	Ubiquitin-like domain-containing protein. (128 aa)
	UBE2NL	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (89 aa)
	MAP3K7	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily. (606 aa)
	LOC108540530	Ubiquitin A-52 residue ribosomal protein fusion product 1. (77 aa)
	LOC108529634	Ubiquitin-like domain-containing protein. (128 aa)
	TAB1	TGF-beta activated kinase 1 (MAP3K7) binding protein 1. (512 aa)
	LOC108520651	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ENSRBIP00000006958	TNF receptor-associated factor. (473 aa)
	LOC108526191	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (112 aa)
	UBA52	Ubiquitin-like domain-containing protein. (232 aa)
	MAPKAPK3	MAPK activated protein kinase 3; Belongs to the protein kinase superfamily. (434 aa)
	TAB2	TGF-beta activated kinase 1 (MAP3K7) binding protein 2. (693 aa)
	ENSRBIP00000012514	Ubiquitin-like domain-containing protein. (121 aa)
	ENSRBIP00000014363	UBIQUITIN_CONJUGAT_2 domain-containing protein. (128 aa)
	ENSRBIP00000014751	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (105 aa)
	IKBKG	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma. (347 aa)
	MAP2K3	Mitogen-activated protein kinase kinase 3; Belongs to the protein kinase superfamily. (394 aa)
	MAP3K20	Mitogen-activated protein kinase kinase kinase 20. (800 aa)
	ENSRBIP00000019157	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (78 aa)
	ENSRBIP00000020228	Uncharacterized protein. (132 aa)
	MAP2K6	Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily. (334 aa)
	ENSRBIP00000022247	Uncharacterized protein. (70 aa)
	LOC108524569	Ubiquitin-like domain-containing protein. (141 aa)
	IRAK1	Interleukin 1 receptor associated kinase 1. (702 aa)
	MAPK14	Mitogen-activated protein kinase. (360 aa)
	ENSRBIP00000029173	Ubiquitin-like domain-containing protein. (166 aa)
	IRAK2	Interleukin 1 receptor associated kinase 2. (537 aa)
	NOD1	Nucleotide binding oligomerization domain containing 1. (953 aa)
	ENSRBIP00000033406	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (142 aa)
	MAPKAPK2	MAPK activated protein kinase 2. (392 aa)
	MAPK11	Mitogen-activated protein kinase. (364 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (522 aa)
	TAB3	TGF-beta activated kinase 1 (MAP3K7) binding protein 3. (690 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSRBIP00000001317	ENSRBIP00000004747	ENSRBIP00000001317	ENSRBIP00000004747	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.803
ENSRBIP00000001317	ENSRBIP00000006958	ENSRBIP00000001317	ENSRBIP00000006958	Ubiquitin-like domain-containing protein.	TNF receptor-associated factor.	0.678
ENSRBIP00000001317	ENSRBIP00000012514	ENSRBIP00000001317	ENSRBIP00000012514	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.806
ENSRBIP00000001317	ENSRBIP00000014363	ENSRBIP00000001317	ENSRBIP00000014363	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.984
ENSRBIP00000001317	ENSRBIP00000014751	ENSRBIP00000001317	ENSRBIP00000014751	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.613
ENSRBIP00000001317	ENSRBIP00000019157	ENSRBIP00000001317	ENSRBIP00000019157	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.613
ENSRBIP00000001317	ENSRBIP00000020228	ENSRBIP00000001317	ENSRBIP00000020228	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.812
ENSRBIP00000001317	ENSRBIP00000033406	ENSRBIP00000001317	ENSRBIP00000033406	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.613
ENSRBIP00000001317	IKBKG	ENSRBIP00000001317	ENSRBIP00000015173	Ubiquitin-like domain-containing protein.	Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.	0.632
ENSRBIP00000001317	LOC108520651	ENSRBIP00000001317	ENSRBIP00000005853	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.613
ENSRBIP00000001317	LOC108524569	ENSRBIP00000001317	ENSRBIP00000025262	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.810
ENSRBIP00000001317	LOC108526191	ENSRBIP00000001317	ENSRBIP00000007914	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.613
ENSRBIP00000001317	LOC108529634	ENSRBIP00000001317	ENSRBIP00000005412	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.803
ENSRBIP00000001317	LOC108540530	ENSRBIP00000001317	ENSRBIP00000005159	Ubiquitin-like domain-containing protein.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.978
ENSRBIP00000001317	MAP3K7	ENSRBIP00000001317	ENSRBIP00000005150	Ubiquitin-like domain-containing protein.	Mitogen-activated protein kinase kinase kinase 7; Belongs to the protein kinase superfamily. STE Ser/Thr protein kinase family. MAP kinase kinase kinase subfamily.	0.403
ENSRBIP00000001317	NOD1	ENSRBIP00000001317	ENSRBIP00000032592	Ubiquitin-like domain-containing protein.	Nucleotide binding oligomerization domain containing 1.	0.561
ENSRBIP00000001317	NOD2	ENSRBIP00000001317	ENSRBIP00000003132	Ubiquitin-like domain-containing protein.	Nucleotide binding oligomerization domain containing 2.	0.412
ENSRBIP00000001317	RPS27A	ENSRBIP00000001317	ENSRBIP00000000621	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.900
ENSRBIP00000001317	TAB2	ENSRBIP00000001317	ENSRBIP00000012513	Ubiquitin-like domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 2.	0.692
ENSRBIP00000001317	TAB3	ENSRBIP00000001317	ENSRBIP00000037298	Ubiquitin-like domain-containing protein.	TGF-beta activated kinase 1 (MAP3K7) binding protein 3.	0.626