63 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSRBIP00000022388	AAA domain-containing protein. (353 aa)
	SPATA5L1	Spermatogenesis associated 5 like 1. (753 aa)
	RAD23B	RAD23 homolog B, nucleotide excision repair protein. (375 aa)
	MARCHF8	Membrane associated ring-CH-type finger 8. (573 aa)
	ENSRBIP00000038433	AAA domain-containing protein; Belongs to the AAA ATPase family. (425 aa)
	DERL1	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (251 aa)
	SYVN1	Synoviolin 1. (616 aa)
	OS9	OS9 endoplasmic reticulum lectin. (720 aa)
	MAN1B1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (699 aa)
	MARCHF6	Membrane associated ring-CH-type finger 6. (910 aa)
	MARCHF1	Membrane associated ring-CH-type finger 1. (544 aa)
	DERL2	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. (239 aa)
	EDEM2	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (578 aa)
	GANAB	Glucosidase II alpha subunit; Belongs to the glycosyl hydrolase 31 family. (972 aa)
	PDIA4	Protein disulfide-isomerase. (657 aa)
	ENSRBIP00000030799	Uncharacterized protein. (372 aa)
	MARCHF3	Membrane associated ring-CH-type finger 3. (138 aa)
	MARCHF2	Membrane associated ring-CH-type finger 2. (284 aa)
	MARCHF11	Membrane associated ring-CH-type finger 11. (379 aa)
	CALR	Calreticulin. (417 aa)
	ENSRBIP00000029173	Ubiquitin-like domain-containing protein. (166 aa)
	MOGS	Mannosyl-oligosaccharide glucosidase. (837 aa)
	CALR3	Calreticulin 3. (352 aa)
	RNF103	Ring finger protein 103. (685 aa)
	AMFR	Autocrine motility factor receptor. (645 aa)
	LOC108524569	Ubiquitin-like domain-containing protein. (141 aa)
	UGGT2	UDP-glucose glycoprotein glucosyltransferase 2. (1422 aa)
	ENGASE	Endo-beta-N-acetylglucosaminidase. (643 aa)
	PDIA3	Protein disulfide-isomerase. (441 aa)
	CLGN	Calmegin. (610 aa)
	RNF5	Ring finger protein 5. (180 aa)
	TRIM13	Tripartite motif containing 13. (410 aa)
	MARCHF9	Membrane associated ring-CH-type finger 9. (349 aa)
	ENSRBIP00000021940	AAA domain-containing protein. (190 aa)
	MARCHF7	Membrane associated ring-CH-type finger 7. (704 aa)
	ENSRBIP00000020228	Uncharacterized protein. (132 aa)
	MARCHF10	Membrane associated ring-CH-type finger 10. (846 aa)
	SPATA5	Spermatogenesis associated 5. (892 aa)
	TRIM54	Tripartite motif containing 54. (402 aa)
	EDEM3	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (905 aa)
	ENSRBIP00000012514	Ubiquitin-like domain-containing protein. (121 aa)
	RNF185	Ring finger protein 185. (195 aa)
	UGGT1	UDP-glucose glycoprotein glucosyltransferase 1. (1558 aa)
	UBXN1	UBX domain protein 1. (310 aa)
	TRIM55	Tripartite motif containing 55. (547 aa)
	UBA52	Ubiquitin-like domain-containing protein. (232 aa)
	PSMC1	Proteasome 26S subunit, ATPase 1; Belongs to the AAA ATPase family. (440 aa)
	EDEM1	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family. (657 aa)
	SEL1L	SEL1L adaptor subunit of ERAD E3 ubiquitin ligase. (794 aa)
	ENSRBIP00000006783	Uncharacterized protein. (80 aa)
	MLEC	Malectin. (291 aa)
	RNF139	Ring finger protein 139. (664 aa)
	LOC108529634	Ubiquitin-like domain-containing protein. (128 aa)
	LOC108540530	Ubiquitin A-52 residue ribosomal protein fusion product 1. (77 aa)
	ENSRBIP00000004747	Ubiquitin-like domain-containing protein. (128 aa)
	CANX	Calnexin. (517 aa)
	ENSRBIP00000004187	Ubiquitin-like domain-containing protein. (153 aa)
	ENSRBIP00000003802	Ubiquitin-like domain-containing protein. (84 aa)
	VCP	Valosin containing protein; Belongs to the AAA ATPase family. (806 aa)
	NGLY1	N-glycanase 1. (653 aa)
	ENSRBIP00000001317	Ubiquitin-like domain-containing protein. (155 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	PRKCSH	Protein kinase C substrate 80K-H. (534 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMFR	DERL1	ENSRBIP00000026873	ENSRBIP00000037845	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.985
AMFR	DERL2	ENSRBIP00000026873	ENSRBIP00000035639	Autocrine motility factor receptor.	Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.	0.914
AMFR	EDEM1	ENSRBIP00000026873	ENSRBIP00000007225	Autocrine motility factor receptor.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.410
AMFR	EDEM2	ENSRBIP00000026873	ENSRBIP00000035336	Autocrine motility factor receptor.	alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.	0.401
AMFR	ENSRBIP00000001317	ENSRBIP00000026873	ENSRBIP00000001317	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.667
AMFR	ENSRBIP00000003802	ENSRBIP00000026873	ENSRBIP00000003802	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.667
AMFR	ENSRBIP00000004187	ENSRBIP00000026873	ENSRBIP00000004187	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.667
AMFR	ENSRBIP00000004747	ENSRBIP00000026873	ENSRBIP00000004747	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.660
AMFR	ENSRBIP00000012514	ENSRBIP00000026873	ENSRBIP00000012514	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.625
AMFR	ENSRBIP00000020228	ENSRBIP00000026873	ENSRBIP00000020228	Autocrine motility factor receptor.	Uncharacterized protein.	0.922
AMFR	ENSRBIP00000021940	ENSRBIP00000026873	ENSRBIP00000021940	Autocrine motility factor receptor.	AAA domain-containing protein.	0.424
AMFR	ENSRBIP00000022388	ENSRBIP00000026873	ENSRBIP00000022388	Autocrine motility factor receptor.	AAA domain-containing protein.	0.424
AMFR	ENSRBIP00000029173	ENSRBIP00000026873	ENSRBIP00000029173	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.667
AMFR	ENSRBIP00000030799	ENSRBIP00000026873	ENSRBIP00000030799	Autocrine motility factor receptor.	Uncharacterized protein.	0.424
AMFR	ENSRBIP00000038433	ENSRBIP00000026873	ENSRBIP00000038433	Autocrine motility factor receptor.	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.424
AMFR	LOC108524569	ENSRBIP00000026873	ENSRBIP00000025262	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.625
AMFR	LOC108529634	ENSRBIP00000026873	ENSRBIP00000005412	Autocrine motility factor receptor.	Ubiquitin-like domain-containing protein.	0.660
AMFR	LOC108540530	ENSRBIP00000026873	ENSRBIP00000005159	Autocrine motility factor receptor.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.625
AMFR	MARCHF6	ENSRBIP00000026873	ENSRBIP00000035847	Autocrine motility factor receptor.	Membrane associated ring-CH-type finger 6.	0.767
AMFR	NGLY1	ENSRBIP00000026873	ENSRBIP00000001857	Autocrine motility factor receptor.	N-glycanase 1.	0.797