32 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CDC42	Uncharacterized protein. (191 aa)
	ENSRBIP00000000419	Uncharacterized protein. (191 aa)
	PPP1R12C	Protein phosphatase 1 regulatory subunit. (811 aa)
	PPP1R16B	Protein phosphatase 1 regulatory subunit 16B. (567 aa)
	MYL9	Myosin light chain 9. (172 aa)
	ENSRBIP00000009998	Uncharacterized protein. (131 aa)
	LIMK1	LIM domain kinase 1. (677 aa)
	PPP1CB	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
	ENSRBIP00000010821	Uncharacterized protein. (441 aa)
	MYL6	Uncharacterized protein. (226 aa)
	LOC108515802	Uncharacterized protein. (139 aa)
	ENSRBIP00000015347	Uncharacterized protein. (182 aa)
	ENSRBIP00000016224	Uncharacterized protein. (184 aa)
	LOC108522676	Protein kinase domain-containing protein. (299 aa)
	MYH14	Myosin heavy chain 14; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1869 aa)
	PAK1	Non-specific serine/threonine protein kinase. (555 aa)
	PAK2	Non-specific serine/threonine protein kinase. (539 aa)
	MYH10	Myosin heavy chain 10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1941 aa)
	MYLK	Myosin light chain kinase. (1656 aa)
	NF2	Neurofibromin 2. (542 aa)
	PPP1R16A	Protein phosphatase 1 regulatory subunit 16A. (528 aa)
	ENSRBIP00000026615	Uncharacterized protein. (185 aa)
	ENSRBIP00000030321	Uncharacterized protein. (819 aa)
	PPP1R12A	Protein phosphatase 1 regulatory subunit. (939 aa)
	ENSRBIP00000032374	Uncharacterized protein. (151 aa)
	CTTN	Cortactin. (620 aa)
	ENSRBIP00000032475	Myosin N-terminal SH3-like domain-containing protein. (161 aa)
	PPP1R12B	Protein phosphatase 1 regulatory subunit. (1045 aa)
	PPP1R27	Protein phosphatase 1 regulatory subunit 27. (154 aa)
	ENSRBIP00000037737	annotation not available (191 aa)
	MYH9	Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1962 aa)
	MYH11	Myosin heavy chain 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2018 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSRBIP00000030321	ENSRBIP00000037478	ENSRBIP00000030321	Uncharacterized protein.	Uncharacterized protein.	0.473
CDC42	LIMK1	ENSRBIP00000037478	ENSRBIP00000010107	Uncharacterized protein.	LIM domain kinase 1.	0.458
CDC42	LOC108522676	ENSRBIP00000037478	ENSRBIP00000018088	Uncharacterized protein.	Protein kinase domain-containing protein.	0.971
CDC42	NF2	ENSRBIP00000037478	ENSRBIP00000024359	Uncharacterized protein.	Neurofibromin 2.	0.422
CDC42	PAK1	ENSRBIP00000037478	ENSRBIP00000020723	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.980
CDC42	PAK2	ENSRBIP00000037478	ENSRBIP00000021432	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.970
CDC42	PPP1CB	ENSRBIP00000037478	ENSRBIP00000010702	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.402
CTTN	LOC108522676	ENSRBIP00000032378	ENSRBIP00000018088	Cortactin.	Protein kinase domain-containing protein.	0.460
CTTN	PAK1	ENSRBIP00000032378	ENSRBIP00000020723	Cortactin.	Non-specific serine/threonine protein kinase.	0.421
ENSRBIP00000000419	ENSRBIP00000030321	ENSRBIP00000000419	ENSRBIP00000030321	Uncharacterized protein.	Uncharacterized protein.	0.473
ENSRBIP00000000419	LIMK1	ENSRBIP00000000419	ENSRBIP00000010107	Uncharacterized protein.	LIM domain kinase 1.	0.458
ENSRBIP00000000419	LOC108522676	ENSRBIP00000000419	ENSRBIP00000018088	Uncharacterized protein.	Protein kinase domain-containing protein.	0.726
ENSRBIP00000000419	NF2	ENSRBIP00000000419	ENSRBIP00000024359	Uncharacterized protein.	Neurofibromin 2.	0.422
ENSRBIP00000000419	PAK1	ENSRBIP00000000419	ENSRBIP00000020723	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.814
ENSRBIP00000000419	PAK2	ENSRBIP00000000419	ENSRBIP00000021432	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.720
ENSRBIP00000000419	PPP1CB	ENSRBIP00000000419	ENSRBIP00000010702	Uncharacterized protein.	Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.	0.402
ENSRBIP00000009998	MYH10	ENSRBIP00000009998	ENSRBIP00000021917	Uncharacterized protein.	Myosin heavy chain 10; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.704
ENSRBIP00000009998	MYH11	ENSRBIP00000009998	ENSRBIP00000039736	Uncharacterized protein.	Myosin heavy chain 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.685
ENSRBIP00000009998	MYH9	ENSRBIP00000009998	ENSRBIP00000038088	Uncharacterized protein.	Myosin heavy chain 9; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.735
ENSRBIP00000009998	MYL9	ENSRBIP00000009998	ENSRBIP00000008909	Uncharacterized protein.	Myosin light chain 9.	0.686