54 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	POLD2	DNA polymerase delta 2, accessory subunit. (504 aa)
	POLE2	DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family. (492 aa)
	POLK	DNA polymerase kappa. (866 aa)
	ENSRBIP00000027334	CULLIN_2 domain-containing protein; Belongs to the cullin family. (299 aa)
	RFC4	Replication factor C subunit 4. (362 aa)
	RFC5	Replication factor C subunit 5. (309 aa)
	ENSRBIP00000029173	Ubiquitin-like domain-containing protein. (166 aa)
	RPA3	Replication protein A3. (121 aa)
	RFC1	Replication factor C subunit 1. (1114 aa)
	PARP3	Poly [ADP-ribose] polymerase. (531 aa)
	CUL4A	Cullin 4A; Belongs to the cullin family. (722 aa)
	GTF2H2	C2H2-type domain-containing protein. (328 aa)
	RFC3	Replication factor C subunit 3. (356 aa)
	LOC108529634	Ubiquitin-like domain-containing protein. (128 aa)
	PCNA	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	ERCC3	ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
	GTF2H1	General transcription factor IIH subunit 1. (558 aa)
	UBA52	Ubiquitin-like domain-containing protein. (232 aa)
	RCBTB2	RCC1 and BTB domain containing protein 2. (556 aa)
	GTF2H4	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
	LOC108540530	Ubiquitin A-52 residue ribosomal protein fusion product 1. (77 aa)
	ENSRBIP00000004747	Ubiquitin-like domain-containing protein. (128 aa)
	LOC108521487	BIVM-ERCC5 readthrough. (1654 aa)
	PARP1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
	POLD3	Uncharacterized protein. (454 aa)
	RPS27A	Ubiquitin-like domain-containing protein. (156 aa)
	ENSRBIP00000001317	Ubiquitin-like domain-containing protein. (155 aa)
	ENSRBIP00000003802	Ubiquitin-like domain-containing protein. (84 aa)
	ENSRBIP00000004187	Ubiquitin-like domain-containing protein. (153 aa)
	ENSRBIP00000034253	BSD domain-containing protein. (465 aa)
	CHD1L	Chromodomain helicase DNA binding protein 1 like. (899 aa)
	POLE3	DNA polymerase epsilon 3, accessory subunit. (147 aa)
	GTF2H3	General transcription factor IIH subunit 3. (308 aa)
	ERCC1	ERCC excision repair 1, endonuclease non-catalytic subunit. (289 aa)
	RBX1	Ring-box 1. (108 aa)
	PARP2	Poly [ADP-ribose] polymerase. (570 aa)
	ENSRBIP00000012514	Ubiquitin-like domain-containing protein. (121 aa)
	GTF2H5	General transcription factor IIH subunit 5. (71 aa)
	ENSRBIP00000013617	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (245 aa)
	ERCC4	ERCC excision repair 4, endonuclease catalytic subunit. (907 aa)
	ERCC2	ERCC excision repair 2, TFIIH core complex helicase subunit. (675 aa)
	ENSRBIP00000015804	Cullin domain-containing protein; Belongs to the cullin family. (280 aa)
	POLD1	DNA polymerase. (1124 aa)
	DDB1	Damage specific DNA binding protein 1. (1140 aa)
	ENSRBIP00000020228	Uncharacterized protein. (132 aa)
	RCBTB1	RCC1 and BTB domain containing protein 1. (531 aa)
	RFC2	Replication factor C subunit 2. (352 aa)
	POLE	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2253 aa)
	DDB2	Damage specific DNA binding protein 2. (427 aa)
	POLD4	Uncharacterized protein. (107 aa)
	LOC108524569	Ubiquitin-like domain-containing protein. (141 aa)
	POLE4	DNA polymerase epsilon 4, accessory subunit. (117 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
	XPA	XPA, DNA damage recognition and repair factor. (303 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CHD1L	CUL4A	ENSRBIP00000035282	ENSRBIP00000033866	Chromodomain helicase DNA binding protein 1 like.	Cullin 4A; Belongs to the cullin family.	0.443
CHD1L	DDB1	ENSRBIP00000035282	ENSRBIP00000019339	Chromodomain helicase DNA binding protein 1 like.	Damage specific DNA binding protein 1.	0.647
CHD1L	DDB2	ENSRBIP00000035282	ENSRBIP00000024461	Chromodomain helicase DNA binding protein 1 like.	Damage specific DNA binding protein 2.	0.744
CHD1L	ENSRBIP00000001317	ENSRBIP00000035282	ENSRBIP00000001317	Chromodomain helicase DNA binding protein 1 like.	Ubiquitin-like domain-containing protein.	0.419
CHD1L	ENSRBIP00000003802	ENSRBIP00000035282	ENSRBIP00000003802	Chromodomain helicase DNA binding protein 1 like.	Ubiquitin-like domain-containing protein.	0.419
CHD1L	ENSRBIP00000004187	ENSRBIP00000035282	ENSRBIP00000004187	Chromodomain helicase DNA binding protein 1 like.	Ubiquitin-like domain-containing protein.	0.419
CHD1L	ENSRBIP00000013617	ENSRBIP00000035282	ENSRBIP00000013617	Chromodomain helicase DNA binding protein 1 like.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.499
CHD1L	ENSRBIP00000015804	ENSRBIP00000035282	ENSRBIP00000015804	Chromodomain helicase DNA binding protein 1 like.	Cullin domain-containing protein; Belongs to the cullin family.	0.443
CHD1L	ENSRBIP00000020228	ENSRBIP00000035282	ENSRBIP00000020228	Chromodomain helicase DNA binding protein 1 like.	Uncharacterized protein.	0.624
CHD1L	ENSRBIP00000027334	ENSRBIP00000035282	ENSRBIP00000027334	Chromodomain helicase DNA binding protein 1 like.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.443
CHD1L	ENSRBIP00000029173	ENSRBIP00000035282	ENSRBIP00000029173	Chromodomain helicase DNA binding protein 1 like.	Ubiquitin-like domain-containing protein.	0.419
CHD1L	ENSRBIP00000034253	ENSRBIP00000035282	ENSRBIP00000034253	Chromodomain helicase DNA binding protein 1 like.	BSD domain-containing protein.	0.530
CHD1L	ERCC1	ENSRBIP00000035282	ENSRBIP00000041181	Chromodomain helicase DNA binding protein 1 like.	ERCC excision repair 1, endonuclease non-catalytic subunit.	0.496
CHD1L	ERCC2	ENSRBIP00000035282	ENSRBIP00000014949	Chromodomain helicase DNA binding protein 1 like.	ERCC excision repair 2, TFIIH core complex helicase subunit.	0.595
CHD1L	ERCC3	ENSRBIP00000035282	ENSRBIP00000007567	Chromodomain helicase DNA binding protein 1 like.	ERCC excision repair 3, TFIIH core complex helicase subunit.	0.680
CHD1L	ERCC4	ENSRBIP00000035282	ENSRBIP00000014844	Chromodomain helicase DNA binding protein 1 like.	ERCC excision repair 4, endonuclease catalytic subunit.	0.665
CHD1L	GTF2H1	ENSRBIP00000035282	ENSRBIP00000007589	Chromodomain helicase DNA binding protein 1 like.	General transcription factor IIH subunit 1.	0.530
CHD1L	GTF2H2	ENSRBIP00000035282	ENSRBIP00000039706	Chromodomain helicase DNA binding protein 1 like.	C2H2-type domain-containing protein.	0.598
CHD1L	GTF2H3	ENSRBIP00000035282	ENSRBIP00000042331	Chromodomain helicase DNA binding protein 1 like.	General transcription factor IIH subunit 3.	0.601
CHD1L	GTF2H5	ENSRBIP00000035282	ENSRBIP00000039876	Chromodomain helicase DNA binding protein 1 like.	General transcription factor IIH subunit 5.	0.624