STRINGSTRING
TAF4 TAF4 POLR2D POLR2D LOC108514681 LOC108514681 TAF9B TAF9B TAF1 TAF1 SUPT5H SUPT5H TAF2 TAF2 ENSRBIP00000033808 ENSRBIP00000033808 ENSRBIP00000034253 ENSRBIP00000034253 GTF2B GTF2B PRF1 PRF1 TAF10 TAF10 SLC39A13 SLC39A13 ELL ELL LOC108518623 LOC108518623 POLR2J POLR2J POLR2B POLR2B NCBP1 NCBP1 GTF2E2 GTF2E2 TAF15 TAF15 TAF5 TAF5 GTF2H2 GTF2H2 GTF2H5 GTF2H5 SUPT4H1 SUPT4H1 EAF2 EAF2 NELFCD NELFCD MLLT3 MLLT3 GTF2A2 GTF2A2 C6orf15 C6orf15 CTR9 CTR9 GTF2H3 GTF2H3 POLR2F POLR2F EAF1 EAF1 CDK9 CDK9 ELOC ELOC GTF2E1 GTF2E1 CCNH CCNH SUPT16H SUPT16H TCEA1 TCEA1 POLR2I POLR2I LEO1 LEO1 C11orf88 C11orf88 GTF2A1 GTF2A1 LOC108545049 LOC108545049 ENSRBIP00000022922 ENSRBIP00000022922 TAF6 TAF6 POLR2K POLR2K CCNQ CCNQ CCNT1 CCNT1 CTDP1 CTDP1 SSRP1 SSRP1 POLR2L POLR2L LOC108519035 LOC108519035 CCNT2 CCNT2 NELFB NELFB MNAT1 MNAT1 ENSRBIP00000017217 ENSRBIP00000017217 ENSRBIP00000016464 ENSRBIP00000016464 AFF1 AFF1 POLR2H POLR2H TAF7L TAF7L WDR61 WDR61 MLLT1 MLLT1 ENSRBIP00000015249 ENSRBIP00000015249 NELFA NELFA ERCC2 ERCC2 IWS1 IWS1 TCEA3 TCEA3 TBPL1 TBPL1 ENSRBIP00000013201 ENSRBIP00000013201 CDC73 CDC73 TAF4B TAF4B LOC108531561 LOC108531561 CDK7 CDK7 AFF4 AFF4 ENSRBIP00000010131 ENSRBIP00000010131 POLR2E POLR2E NELFE NELFE NCBP2 NCBP2 PAF1 PAF1 LOC108518889 LOC108518889 GTF2H1 GTF2H1 ERCC3 ERCC3 ENSRBIP00000006972 ENSRBIP00000006972 POLR2C POLR2C TCEA2 TCEA2 GTF2H4 GTF2H4 ENSRBIP00000004787 ENSRBIP00000004787 TAF11 TAF11 GTF2F2 GTF2F2 TBP TBP ELOB ELOB CINP CINP TCEANC2 TCEANC2 TAF3 TAF3 CCNK CCNK SUPT6H SUPT6H ENSRBIP00000003370 ENSRBIP00000003370 ELOA ELOA POLR2G POLR2G ENSRBIP00000001461 ENSRBIP00000001461 ELOA2 ELOA2 TAF12 TAF12 ENSRBIP00000001156 ENSRBIP00000001156 POLR2A POLR2A GTF2F1 GTF2F1 RTF1 RTF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF4TATA-box binding protein associated factor 4. (1026 aa)
POLR2DRNA polymerase II subunit D. (142 aa)
LOC108514681Uncharacterized protein. (252 aa)
TAF9BTATA-box binding protein associated factor 9b. (251 aa)
TAF1TATA-box binding protein associated factor 1. (1713 aa)
SUPT5HTranscription elongation factor SPT5. (1073 aa)
TAF2TATA-box binding protein associated factor 2. (863 aa)
ENSRBIP00000033808Uncharacterized protein. (73 aa)
ENSRBIP00000034253BSD domain-containing protein. (465 aa)
GTF2BGeneral transcription factor IIB. (222 aa)
PRF1Perforin 1. (555 aa)
TAF10Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (229 aa)
SLC39A13Solute carrier family 39 member 13. (370 aa)
ELLElongation factor for RNA polymerase II. (611 aa)
LOC108518623TAFII28 domain-containing protein. (193 aa)
POLR2JRNA_pol_L_2 domain-containing protein. (159 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1156 aa)
NCBP1Nuclear cap binding protein subunit 1. (790 aa)
GTF2E2Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (289 aa)
TAF15TATA-box binding protein associated factor 15. (592 aa)
TAF5TATA-box binding protein associated factor 5. (610 aa)
GTF2H2C2H2-type domain-containing protein. (328 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
SUPT4H1Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
EAF2ELL associated factor 2. (263 aa)
NELFCDNegative elongation factor complex member C/D. (605 aa)
MLLT3MLLT3 super elongation complex subunit. (369 aa)
GTF2A2Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (109 aa)
C6orf15Chromosome 6 open reading frame 15. (311 aa)
CTR9CTR9 homolog, Paf1/RNA polymerase II complex component. (1171 aa)
GTF2H3General transcription factor IIH subunit 3. (308 aa)
POLR2FRNA polymerase II subunit F. (150 aa)
EAF1ELL associated factor 1. (268 aa)
CDK9Cyclin dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
ELOCSkp1_POZ domain-containing protein; Belongs to the SKP1 family. (112 aa)
GTF2E1General transcription factor IIE subunit 1. (289 aa)
CCNHCyclin H; Belongs to the cyclin family. (325 aa)
SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit. (1047 aa)
TCEA1Transcription elongation factor A1. (270 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (666 aa)
C11orf88Chromosome 11 open reading frame 88. (195 aa)
GTF2A1General transcription factor IIA subunit 1. (376 aa)
LOC108545049CYCLIN domain-containing protein; Belongs to the cyclin family. (264 aa)
ENSRBIP00000022922Protein kinase domain-containing protein. (254 aa)
TAF6TATA-box binding protein associated factor 6. (737 aa)
POLR2KRNA polymerase II subunit K. (58 aa)
CCNQCyclin N-terminal domain-containing protein. (186 aa)
CCNT1Cyclin T1; Belongs to the cyclin family. (725 aa)
CTDP1RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (725 aa)
SSRP1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (709 aa)
POLR2LRNA polymerase II subunit L. (67 aa)
LOC108519035TFIIS N-terminal domain-containing protein. (527 aa)
CCNT2Cyclin T2; Belongs to the cyclin family. (721 aa)
NELFBNegative elongation factor complex member B. (581 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (269 aa)
ENSRBIP00000017217Uncharacterized protein. (71 aa)
ENSRBIP00000016464TFIIA_gamma_C domain-containing protein. (74 aa)
AFF1AF4/FMR2 family member 1. (1221 aa)
POLR2HRNA polymerase II subunit H. (174 aa)
TAF7LTATA-box binding protein associated factor 7 like. (464 aa)
WDR61WD repeat domain 61. (305 aa)
MLLT1MLLT1 super elongation complex subunit. (523 aa)
ENSRBIP00000015249Ubiquitin-like domain-containing protein. (137 aa)
NELFANegative elongation factor complex member A. (539 aa)
ERCC2ERCC excision repair 2, TFIIH core complex helicase subunit. (675 aa)
IWS1Interacts with SUPT6H, CTD assembly factor 1. (819 aa)
TCEA3Transcription elongation factor A3. (359 aa)
TBPL1TATA-box binding protein like 1. (186 aa)
ENSRBIP00000013201TFIIS N-terminal domain-containing protein. (47 aa)
CDC73Cell division cycle 73. (531 aa)
TAF4BTATA-box binding protein associated factor 4b. (862 aa)
LOC108531561Ubiquitin-like domain-containing protein. (118 aa)
CDK7Cyclin dependent kinase 7; Belongs to the protein kinase superfamily. (346 aa)
AFF4AF4/FMR2 family member 4. (1134 aa)
ENSRBIP00000010131RRM domain-containing protein. (325 aa)
POLR2ERNA polymerase II subunit E. (210 aa)
NELFENegative elongation factor complex member E. (390 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (166 aa)
PAF1PAF1 homolog, Paf1/RNA polymerase II complex component. (531 aa)
LOC108518889Uncharacterized protein. (238 aa)
GTF2H1General transcription factor IIH subunit 1. (558 aa)
ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit. (782 aa)
ENSRBIP00000006972Uncharacterized protein. (194 aa)
POLR2CRNA polymerase II subunit C. (275 aa)
TCEA2Transcription elongation factor A2. (302 aa)
GTF2H4General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (462 aa)
ENSRBIP00000004787Skp1_POZ domain-containing protein. (66 aa)
TAF11TATA-box binding protein associated factor 11. (211 aa)
GTF2F2General transcription factor IIF subunit 2. (232 aa)
TBPTATA-box binding protein. (338 aa)
ELOBUbiquitin-like domain-containing protein. (195 aa)
CINPCyclin dependent kinase 2 interacting protein. (227 aa)
TCEANC2Transcription elongation factor A N-terminal and central domain containing 2. (208 aa)
TAF3TATA-box binding protein associated factor 3. (838 aa)
CCNKCyclin K; Belongs to the cyclin family. (542 aa)
SUPT6HTranscription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family. (1726 aa)
ENSRBIP00000003370Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (431 aa)
ELOAElongin A. (800 aa)
POLR2GRNA polymerase II subunit G. (172 aa)
ENSRBIP00000001461Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (104 aa)
ELOA2TFIIS N-terminal domain-containing protein. (755 aa)
TAF12TATA-box binding protein associated factor 12. (213 aa)
ENSRBIP00000001156Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (115 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1941 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (469 aa)
RTF1RTF1 homolog, Paf1/RNA polymerase II complex component. (687 aa)
Your Current Organism:
Rhinopithecus bieti
NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey
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