85 items (Rhinopithecus bieti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYNM	Synemin; Belongs to the intermediate filament family. (1552 aa)
	KRT80	Keratin 80; Belongs to the intermediate filament family. (452 aa)
	SYNC	Syncoilin, intermediate filament protein; Belongs to the intermediate filament family. (501 aa)
	KRT19	IF rod domain-containing protein; Belongs to the intermediate filament family. (386 aa)
	KRT39	Keratin 39; Belongs to the intermediate filament family. (491 aa)
	IFFO1	Intermediate filament family orphan 1; Belongs to the intermediate filament family. (571 aa)
	ENSRBIP00000017297	IF rod domain-containing protein; Belongs to the intermediate filament family. (387 aa)
	KRT35	Keratin 35; Belongs to the intermediate filament family. (455 aa)
	KRT1	Keratin 1; Belongs to the intermediate filament family. (642 aa)
	KRT8	Keratin 8; Belongs to the intermediate filament family. (499 aa)
	ENSRBIP00000026909	IF rod domain-containing protein; Belongs to the intermediate filament family. (399 aa)
	ENSRBIP00000027759	IF rod domain-containing protein; Belongs to the intermediate filament family. (475 aa)
	LOC108525702	IF rod domain-containing protein; Belongs to the intermediate filament family. (265 aa)
	KRT71	Keratin 71; Belongs to the intermediate filament family. (525 aa)
	KRT16	Keratin 16; Belongs to the intermediate filament family. (478 aa)
	KRT13	IF rod domain-containing protein; Belongs to the intermediate filament family. (450 aa)
	KRT20	Keratin 20; Belongs to the intermediate filament family. (424 aa)
	KRT83	Keratin 83; Belongs to the intermediate filament family. (493 aa)
	LOC108534687	IF rod domain-containing protein; Belongs to the intermediate filament family. (430 aa)
	KRT86	Keratin 86; Belongs to the intermediate filament family. (436 aa)
	GFAP	Glial fibrillary acidic protein; Belongs to the intermediate filament family. (514 aa)
	KRT33B	Keratin 33B; Belongs to the intermediate filament family. (404 aa)
	KRT73	Keratin 73; Belongs to the intermediate filament family. (540 aa)
	KRT27	Keratin 27; Belongs to the intermediate filament family. (459 aa)
	LMNA	Lamin A/C; Belongs to the intermediate filament family. (728 aa)
	KRT10	Keratin 10; Belongs to the intermediate filament family. (558 aa)
	BFSP1	Beaded filament structural protein 1; Belongs to the intermediate filament family. (665 aa)
	PRPH	Peripherin; Belongs to the intermediate filament family. (476 aa)
	INA	IF rod domain-containing protein; Belongs to the intermediate filament family. (428 aa)
	ENSRBIP00000039585	IF rod domain-containing protein; Belongs to the intermediate filament family. (411 aa)
	KRT34	Keratin 34; Belongs to the intermediate filament family. (414 aa)
	KRT4	Keratin 4; Belongs to the intermediate filament family. (520 aa)
	KRT7	Keratin 7; Belongs to the intermediate filament family. (474 aa)
	KRT24	Keratin 24; Belongs to the intermediate filament family. (508 aa)
	KRT79	Keratin 79; Belongs to the intermediate filament family. (528 aa)
	KRT25	Keratin 25; Belongs to the intermediate filament family. (450 aa)
	NEFM	Neurofilament medium; Belongs to the intermediate filament family. (893 aa)
	KRT82	Keratin 82; Belongs to the intermediate filament family. (513 aa)
	ENSRBIP00000042697	IF rod domain-containing protein; Belongs to the intermediate filament family. (222 aa)
	KRT15	Keratin 15; Belongs to the intermediate filament family. (419 aa)
	LOC108534732	Keratin 33A; Belongs to the intermediate filament family. (397 aa)
	ENSRBIP00000025472	IF rod domain-containing protein; Belongs to the intermediate filament family. (245 aa)
	KRT31	IF rod domain-containing protein; Belongs to the intermediate filament family. (406 aa)
	KRT26	Keratin 26; Belongs to the intermediate filament family. (467 aa)
	NEFH	Neurofilament heavy; Belongs to the intermediate filament family. (896 aa)
	KRT85	Keratin 85; Belongs to the intermediate filament family. (507 aa)
	KRT74	Keratin 74; Belongs to the intermediate filament family. (543 aa)
	LOC108541611	IF rod domain-containing protein; Belongs to the intermediate filament family. (430 aa)
	KRT28	Keratin 28; Belongs to the intermediate filament family. (464 aa)
	KRT36	Keratin 36; Belongs to the intermediate filament family. (467 aa)
	LMNB2	Lamin B2; Belongs to the intermediate filament family. (633 aa)
	NES	Nestin; Belongs to the intermediate filament family. (1719 aa)
	LMNB1	Lamin B1; Belongs to the intermediate filament family. (586 aa)
	KRT9	Keratin 9; Belongs to the intermediate filament family. (580 aa)
	ENSRBIP00000000813	IF rod domain-containing protein; Belongs to the intermediate filament family. (475 aa)
	KRT6A	IF rod domain-containing protein; Belongs to the intermediate filament family. (527 aa)
	ENSRBIP00000000125	IF rod domain-containing protein; Belongs to the intermediate filament family. (430 aa)
	KRT38	Keratin 38; Belongs to the intermediate filament family. (452 aa)
	KRT40	Keratin 40; Belongs to the intermediate filament family. (431 aa)
	NEFL	Neurofilament light; Belongs to the intermediate filament family. (491 aa)
	ENSRBIP00000009563	IF rod domain-containing protein; Belongs to the intermediate filament family. (372 aa)
	BFSP2	Beaded filament structural protein 2; Belongs to the intermediate filament family. (361 aa)
	VIM	Vimentin; Belongs to the intermediate filament family. (466 aa)
	KRT76	Keratin 76; Belongs to the intermediate filament family. (637 aa)
	KRT23	Keratin 23; Belongs to the intermediate filament family. (422 aa)
	KRT81	Keratin 81; Belongs to the intermediate filament family. (505 aa)
	ENSRBIP00000011812	IF rod domain-containing protein; Belongs to the intermediate filament family. (402 aa)
	KRT84	Keratin 84; Belongs to the intermediate filament family. (600 aa)
	KRT5	Keratin 5; Belongs to the intermediate filament family. (589 aa)
	KRT12	Keratin 12; Belongs to the intermediate filament family. (494 aa)
	KRT75	Keratin 75; Belongs to the intermediate filament family. (551 aa)
	ENSRBIP00000007193	IF rod domain-containing protein; Belongs to the intermediate filament family. (430 aa)
	KRT72	Keratin 72; Belongs to the intermediate filament family. (511 aa)
	LOC108521570	IF rod domain-containing protein; Belongs to the intermediate filament family. (552 aa)
	ENSRBIP00000026752	IF rod domain-containing protein; Belongs to the intermediate filament family. (412 aa)
	KRT2	Keratin 2; Belongs to the intermediate filament family. (626 aa)
	DES	Desmin; Belongs to the intermediate filament family. (470 aa)
	KRT14	Keratin 14; Belongs to the intermediate filament family. (469 aa)
	KRT78	Keratin 78; Belongs to the intermediate filament family. (514 aa)
	IFFO2	Intermediate filament family orphan 2; Belongs to the intermediate filament family. (392 aa)
	ENSRBIP00000020509	IF rod domain-containing protein; Belongs to the intermediate filament family. (409 aa)
	LOC108532547	IF rod domain-containing protein; Belongs to the intermediate filament family. (430 aa)
	KRT3	Keratin 3; Belongs to the intermediate filament family. (629 aa)
	KRT32	Keratin 32; Belongs to the intermediate filament family. (448 aa)
	KRT37	Keratin 37; Belongs to the intermediate filament family. (428 aa)

Your Current Organism:

Rhinopithecus bieti

NCBI taxonomy Id: 61621
Other names: Pygathrix bieti, R. bieti, black snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BFSP1	BFSP2	ENSRBIP00000037670	ENSRBIP00000009597	Beaded filament structural protein 1; Belongs to the intermediate filament family.	Beaded filament structural protein 2; Belongs to the intermediate filament family.	0.703
BFSP1	SYNM	ENSRBIP00000037670	ENSRBIP00000013452	Beaded filament structural protein 1; Belongs to the intermediate filament family.	Synemin; Belongs to the intermediate filament family.	0.582
BFSP2	BFSP1	ENSRBIP00000009597	ENSRBIP00000037670	Beaded filament structural protein 2; Belongs to the intermediate filament family.	Beaded filament structural protein 1; Belongs to the intermediate filament family.	0.703
DES	GFAP	ENSRBIP00000022669	ENSRBIP00000033788	Desmin; Belongs to the intermediate filament family.	Glial fibrillary acidic protein; Belongs to the intermediate filament family.	0.600
DES	NES	ENSRBIP00000022669	ENSRBIP00000002223	Desmin; Belongs to the intermediate filament family.	Nestin; Belongs to the intermediate filament family.	0.502
DES	SYNC	ENSRBIP00000022669	ENSRBIP00000013879	Desmin; Belongs to the intermediate filament family.	Syncoilin, intermediate filament protein; Belongs to the intermediate filament family.	0.608
DES	VIM	ENSRBIP00000022669	ENSRBIP00000009913	Desmin; Belongs to the intermediate filament family.	Vimentin; Belongs to the intermediate filament family.	0.786
ENSRBIP00000000125	ENSRBIP00000000813	ENSRBIP00000000125	ENSRBIP00000000813	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000125	ENSRBIP00000011812	ENSRBIP00000000125	ENSRBIP00000011812	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000125	ENSRBIP00000020509	ENSRBIP00000000125	ENSRBIP00000020509	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000125	ENSRBIP00000025472	ENSRBIP00000000125	ENSRBIP00000025472	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.679
ENSRBIP00000000125	KRT8	ENSRBIP00000000125	ENSRBIP00000018719	IF rod domain-containing protein; Belongs to the intermediate filament family.	Keratin 8; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000813	ENSRBIP00000000125	ENSRBIP00000000813	ENSRBIP00000000125	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000813	ENSRBIP00000007193	ENSRBIP00000000813	ENSRBIP00000007193	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000813	ENSRBIP00000009563	ENSRBIP00000000813	ENSRBIP00000009563	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.421
ENSRBIP00000000813	ENSRBIP00000017297	ENSRBIP00000000813	ENSRBIP00000017297	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.421
ENSRBIP00000000813	ENSRBIP00000026909	ENSRBIP00000000813	ENSRBIP00000026909	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.695
ENSRBIP00000000813	ENSRBIP00000039585	ENSRBIP00000000813	ENSRBIP00000039585	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.683
ENSRBIP00000000813	KRT19	ENSRBIP00000000813	ENSRBIP00000014709	IF rod domain-containing protein; Belongs to the intermediate filament family.	IF rod domain-containing protein; Belongs to the intermediate filament family.	0.421
ENSRBIP00000000813	KRT7	ENSRBIP00000000813	ENSRBIP00000040707	IF rod domain-containing protein; Belongs to the intermediate filament family.	Keratin 7; Belongs to the intermediate filament family.	0.423