(5 nodes) Mixed, incl. GrpE, and Tim44-like domain network (Rhinopithecus roxellana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GRPEL1	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. (217 aa)
	HSPA9	Uncharacterized protein; Belongs to the heat shock protein 70 family. (679 aa)
	DNAJA3	DnaJ heat shock protein family (Hsp40) member A3. (480 aa)
	TIMM44	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (479 aa)
	ENSRROP00000042131	Uncharacterized protein; Belongs to the heat shock protein 70 family. (581 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DNAJA3	ENSRROP00000042131	ENSRROP00000023808	ENSRROP00000042131	DnaJ heat shock protein family (Hsp40) member A3.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.899
DNAJA3	GRPEL1	ENSRROP00000023808	ENSRROP00000002863	DnaJ heat shock protein family (Hsp40) member A3.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.756
DNAJA3	HSPA9	ENSRROP00000023808	ENSRROP00000022763	DnaJ heat shock protein family (Hsp40) member A3.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.900
DNAJA3	TIMM44	ENSRROP00000023808	ENSRROP00000039729	DnaJ heat shock protein family (Hsp40) member A3.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.741
ENSRROP00000042131	DNAJA3	ENSRROP00000042131	ENSRROP00000023808	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DnaJ heat shock protein family (Hsp40) member A3.	0.899
ENSRROP00000042131	GRPEL1	ENSRROP00000042131	ENSRROP00000002863	Uncharacterized protein; Belongs to the heat shock protein 70 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.855
ENSRROP00000042131	TIMM44	ENSRROP00000042131	ENSRROP00000039729	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.898
GRPEL1	DNAJA3	ENSRROP00000002863	ENSRROP00000023808	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	DnaJ heat shock protein family (Hsp40) member A3.	0.756
GRPEL1	ENSRROP00000042131	ENSRROP00000002863	ENSRROP00000042131	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.855
GRPEL1	HSPA9	ENSRROP00000002863	ENSRROP00000022763	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.855
GRPEL1	TIMM44	ENSRROP00000002863	ENSRROP00000039729	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.945
HSPA9	DNAJA3	ENSRROP00000022763	ENSRROP00000023808	Uncharacterized protein; Belongs to the heat shock protein 70 family.	DnaJ heat shock protein family (Hsp40) member A3.	0.900
HSPA9	GRPEL1	ENSRROP00000022763	ENSRROP00000002863	Uncharacterized protein; Belongs to the heat shock protein 70 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.855
HSPA9	TIMM44	ENSRROP00000022763	ENSRROP00000039729	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	0.898
TIMM44	DNAJA3	ENSRROP00000039729	ENSRROP00000023808	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	DnaJ heat shock protein family (Hsp40) member A3.	0.741
TIMM44	ENSRROP00000042131	ENSRROP00000039729	ENSRROP00000042131	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.898
TIMM44	GRPEL1	ENSRROP00000039729	ENSRROP00000002863	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.	0.945
TIMM44	HSPA9	ENSRROP00000039729	ENSRROP00000022763	Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.898