(24 nodes) Small-subunit processome, and Positive regulation of rRNA processing network (Rhinopithecus roxellana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UTP3	UTP3 small subunit processome component. (477 aa)
	UTP11	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (270 aa)
	WDR46	WD repeat domain 46. (612 aa)
	TBL3	Transducin beta like 3. (808 aa)
	WDR3	WD repeat domain 3. (943 aa)
	UTP14A	UTP14A small subunit processome component. (771 aa)
	KRR1	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (381 aa)
	RCL1	RNA terminal phosphate cyclase like 1. (373 aa)
	PDCD11	Programmed cell death 11. (1871 aa)
	UTP4	UTP4 small subunit processome component. (517 aa)
	PWP2	Uncharacterized protein. (918 aa)
	WDR75	WD repeat domain 75. (830 aa)
	EMG1	EMG1 N1-specific pseudouridine methyltransferase. (244 aa)
	NOC4L	Nucleolar complex associated 4 homolog. (516 aa)
	UTP15	UTP15 small subunit processome component. (518 aa)
	WDR43	WD repeat domain 43. (689 aa)
	RRP7A	Ribosomal RNA processing 7 homolog A. (281 aa)
	UTP6	UTP6 small subunit processome component. (598 aa)
	HEATR1	HEAT repeat containing 1. (2144 aa)
	NOL6	Nucleolar protein 6. (1157 aa)
	UTP18	UTP18 small subunit processome component. (596 aa)
	UTP20	UTP20 small subunit processome component. (2786 aa)
	WDR36	WD repeat domain 36. (758 aa)
	NOP14	NOP14 nucleolar protein. (857 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMG1	HEATR1	ENSRROP00000017730	ENSRROP00000026907	EMG1 N1-specific pseudouridine methyltransferase.	HEAT repeat containing 1.	0.995
EMG1	KRR1	ENSRROP00000017730	ENSRROP00000010505	EMG1 N1-specific pseudouridine methyltransferase.	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.	0.999
EMG1	NOC4L	ENSRROP00000017730	ENSRROP00000018561	EMG1 N1-specific pseudouridine methyltransferase.	Nucleolar complex associated 4 homolog.	0.999
EMG1	NOL6	ENSRROP00000017730	ENSRROP00000030650	EMG1 N1-specific pseudouridine methyltransferase.	Nucleolar protein 6.	0.995
EMG1	NOP14	ENSRROP00000017730	ENSRROP00000045682	EMG1 N1-specific pseudouridine methyltransferase.	NOP14 nucleolar protein.	0.999
EMG1	PDCD11	ENSRROP00000017730	ENSRROP00000012353	EMG1 N1-specific pseudouridine methyltransferase.	Programmed cell death 11.	0.994
EMG1	PWP2	ENSRROP00000017730	ENSRROP00000015537	EMG1 N1-specific pseudouridine methyltransferase.	Uncharacterized protein.	0.990
EMG1	RCL1	ENSRROP00000017730	ENSRROP00000010783	EMG1 N1-specific pseudouridine methyltransferase.	RNA terminal phosphate cyclase like 1.	0.991
EMG1	RRP7A	ENSRROP00000017730	ENSRROP00000026039	EMG1 N1-specific pseudouridine methyltransferase.	Ribosomal RNA processing 7 homolog A.	0.985
EMG1	TBL3	ENSRROP00000017730	ENSRROP00000006959	EMG1 N1-specific pseudouridine methyltransferase.	Transducin beta like 3.	0.975
EMG1	UTP11	ENSRROP00000017730	ENSRROP00000002993	EMG1 N1-specific pseudouridine methyltransferase.	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.	0.997
EMG1	UTP14A	ENSRROP00000017730	ENSRROP00000008429	EMG1 N1-specific pseudouridine methyltransferase.	UTP14A small subunit processome component.	0.995
EMG1	UTP15	ENSRROP00000017730	ENSRROP00000021081	EMG1 N1-specific pseudouridine methyltransferase.	UTP15 small subunit processome component.	0.991
EMG1	UTP18	ENSRROP00000017730	ENSRROP00000034254	EMG1 N1-specific pseudouridine methyltransferase.	UTP18 small subunit processome component.	0.993
EMG1	UTP20	ENSRROP00000017730	ENSRROP00000035549	EMG1 N1-specific pseudouridine methyltransferase.	UTP20 small subunit processome component.	0.996
EMG1	UTP3	ENSRROP00000017730	ENSRROP00000001664	EMG1 N1-specific pseudouridine methyltransferase.	UTP3 small subunit processome component.	0.996
EMG1	UTP4	ENSRROP00000017730	ENSRROP00000013994	EMG1 N1-specific pseudouridine methyltransferase.	UTP4 small subunit processome component.	0.994
EMG1	UTP6	ENSRROP00000017730	ENSRROP00000026214	EMG1 N1-specific pseudouridine methyltransferase.	UTP6 small subunit processome component.	0.990
EMG1	WDR3	ENSRROP00000017730	ENSRROP00000007800	EMG1 N1-specific pseudouridine methyltransferase.	WD repeat domain 3.	0.964
EMG1	WDR36	ENSRROP00000017730	ENSRROP00000037896	EMG1 N1-specific pseudouridine methyltransferase.	WD repeat domain 36.	0.975