(29 nodes) Mixed, incl. Glycine rich nucleic binding domain, and Splicing factor, RBM39-like network (Rhinopithecus roxellana)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DDX5	DEAD-box helicase 5; Belongs to the DEAD box helicase family. (614 aa)
	SREK1	Splicing regulatory glutamic acid and lysine rich protein 1. (626 aa)
	HTATSF1	HIV-1 Tat specific factor 1. (754 aa)
	ZRANB2	Zinc finger Ran-binding domain-containing protein 2; May interfere with constitutive 5'-splice site selection. Belongs to the ZRANB2 family. (330 aa)
	RBM6	RNA binding motif protein 6. (1123 aa)
	SUGP1	SURP and G-patch domain containing 1. (645 aa)
	DDX3X	DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family. (723 aa)
	ENSRROP00000013557	Uncharacterized protein. (537 aa)
	LOC104669438	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (461 aa)
	NKTR	Natural killer cell triggering receptor. (1437 aa)
	ENSRROP00000015516	Helicase C-terminal domain-containing protein. (319 aa)
	PRPF40A	Pre-mRNA processing factor 40 homolog A. (930 aa)
	PNISR	PNN interacting serine and arginine rich protein. (816 aa)
	RBM39	RNA binding motif protein 39. (530 aa)
	CCAR1	Cell division cycle and apoptosis regulator 1. (1150 aa)
	SRSF11	Serine and arginine rich splicing factor 11. (483 aa)
	LUC7L3	LUC7 like 3 pre-mRNA splicing factor. (480 aa)
	ZFC3H1	Zinc finger C3H1-type containing. (1989 aa)
	RBM5	RNA binding motif protein 5. (821 aa)
	ENSRROP00000036150	PWI domain-containing protein. (408 aa)
	SON	SON DNA binding protein. (2412 aa)
	PRPF4B	Pre-mRNA processing factor 4B. (1007 aa)
	RBM10	RNA binding motif protein 10. (995 aa)
	TCERG1	Transcription elongation regulator 1. (1092 aa)
	RBM23	RNA binding motif protein 23. (442 aa)
	DHX29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1367 aa)
	DHX9	DExH-box helicase 9. (1275 aa)
	DDX17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (735 aa)
	TTC14	Tetratricopeptide repeat domain 14. (771 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCAR1	DDX17	ENSRROP00000031226	ENSRROP00000044912	Cell division cycle and apoptosis regulator 1.	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	0.420
CCAR1	DDX5	ENSRROP00000031226	ENSRROP00000000105	Cell division cycle and apoptosis regulator 1.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.517
CCAR1	DHX9	ENSRROP00000031226	ENSRROP00000043409	Cell division cycle and apoptosis regulator 1.	DExH-box helicase 9.	0.459
CCAR1	ENSRROP00000015516	ENSRROP00000031226	ENSRROP00000015516	Cell division cycle and apoptosis regulator 1.	Helicase C-terminal domain-containing protein.	0.460
CCAR1	HTATSF1	ENSRROP00000031226	ENSRROP00000005318	Cell division cycle and apoptosis regulator 1.	HIV-1 Tat specific factor 1.	0.460
CCAR1	LUC7L3	ENSRROP00000031226	ENSRROP00000032590	Cell division cycle and apoptosis regulator 1.	LUC7 like 3 pre-mRNA splicing factor.	0.414
CCAR1	PRPF40A	ENSRROP00000031226	ENSRROP00000017798	Cell division cycle and apoptosis regulator 1.	Pre-mRNA processing factor 40 homolog A.	0.840
CCAR1	PRPF4B	ENSRROP00000031226	ENSRROP00000039791	Cell division cycle and apoptosis regulator 1.	Pre-mRNA processing factor 4B.	0.525
CCAR1	RBM10	ENSRROP00000031226	ENSRROP00000040291	Cell division cycle and apoptosis regulator 1.	RNA binding motif protein 10.	0.549
CCAR1	RBM23	ENSRROP00000031226	ENSRROP00000041699	Cell division cycle and apoptosis regulator 1.	RNA binding motif protein 23.	0.478
CCAR1	RBM39	ENSRROP00000031226	ENSRROP00000027400	Cell division cycle and apoptosis regulator 1.	RNA binding motif protein 39.	0.549
CCAR1	RBM5	ENSRROP00000031226	ENSRROP00000035793	Cell division cycle and apoptosis regulator 1.	RNA binding motif protein 5.	0.574
CCAR1	RBM6	ENSRROP00000031226	ENSRROP00000010050	Cell division cycle and apoptosis regulator 1.	RNA binding motif protein 6.	0.507
CCAR1	TCERG1	ENSRROP00000031226	ENSRROP00000040751	Cell division cycle and apoptosis regulator 1.	Transcription elongation regulator 1.	0.764
DDX17	CCAR1	ENSRROP00000044912	ENSRROP00000031226	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Cell division cycle and apoptosis regulator 1.	0.420
DDX17	DDX3X	ENSRROP00000044912	ENSRROP00000011882	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD-box helicase 3 X-linked; Belongs to the DEAD box helicase family.	0.590
DDX17	DDX5	ENSRROP00000044912	ENSRROP00000000105	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD-box helicase 5; Belongs to the DEAD box helicase family.	0.900
DDX17	DHX29	ENSRROP00000044912	ENSRROP00000041789	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	0.411
DDX17	DHX9	ENSRROP00000044912	ENSRROP00000043409	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DExH-box helicase 9.	0.814
DDX17	ENSRROP00000013557	ENSRROP00000044912	ENSRROP00000013557	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Uncharacterized protein.	0.432