19 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PTPN4	Tyrosine-protein phosphatase non-receptor type; May act at junctions between the membrane and the cytoskeleton. (892 aa)
	ENSRROP00000042123	Uncharacterized protein. (251 aa)
	ENSRROP00000011759	Uncharacterized protein. (274 aa)
	ENSRROP00000011896	Tyrosine-protein phosphatase non-receptor type. (354 aa)
	PTPN22	Protein tyrosine phosphatase non-receptor type 22. (813 aa)
	PTPN7	Protein tyrosine phosphatase non-receptor type 7. (468 aa)
	PTPN12	Tyrosine-protein phosphatase non-receptor type 12; Dephosphorylates a range of proteins, and thereby regulates cellular signaling cascades. (780 aa)
	PTPN11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	PTPN9	Protein tyrosine phosphatase non-receptor type 9. (593 aa)
	ENSRROP00000010437	Uncharacterized protein. (235 aa)
	ENSRROP00000019438	Uncharacterized protein. (178 aa)
	ENSRROP00000021422	Uncharacterized protein. (534 aa)
	ENSRROP00000026852	Uncharacterized protein. (321 aa)
	PTPN6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (623 aa)
	DUSP22	Dual specificity phosphatase 22; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (205 aa)
	ACP1	Acid phosphatase 1. (158 aa)
	ENSRROP00000036200	Uncharacterized protein. (491 aa)
	PTPN1	Tyrosine-protein phosphatase non-receptor type. (465 aa)
	PTPN2	Tyrosine-protein phosphatase non-receptor type. (415 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSRROP00000010437	ENSRROP00000011759	ENSRROP00000010437	ENSRROP00000011759	Uncharacterized protein.	Uncharacterized protein.	0.896
ENSRROP00000010437	ENSRROP00000042123	ENSRROP00000010437	ENSRROP00000042123	Uncharacterized protein.	Uncharacterized protein.	0.477
ENSRROP00000010437	PTPN1	ENSRROP00000010437	ENSRROP00000037737	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type.	0.586
ENSRROP00000010437	PTPN2	ENSRROP00000010437	ENSRROP00000000508	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type.	0.675
ENSRROP00000010437	PTPN7	ENSRROP00000010437	ENSRROP00000013698	Uncharacterized protein.	Protein tyrosine phosphatase non-receptor type 7.	0.539
ENSRROP00000011759	ENSRROP00000010437	ENSRROP00000011759	ENSRROP00000010437	Uncharacterized protein.	Uncharacterized protein.	0.896
ENSRROP00000036200	PTPN6	ENSRROP00000036200	ENSRROP00000029139	Uncharacterized protein.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.405
ENSRROP00000042123	ENSRROP00000010437	ENSRROP00000042123	ENSRROP00000010437	Uncharacterized protein.	Uncharacterized protein.	0.477
PTPN1	ENSRROP00000010437	ENSRROP00000037737	ENSRROP00000010437	Tyrosine-protein phosphatase non-receptor type.	Uncharacterized protein.	0.586
PTPN1	PTPN11	ENSRROP00000037737	ENSRROP00000015111	Tyrosine-protein phosphatase non-receptor type.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.915
PTPN11	PTPN1	ENSRROP00000015111	ENSRROP00000037737	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein phosphatase non-receptor type.	0.915
PTPN11	PTPN6	ENSRROP00000015111	ENSRROP00000029139	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.935
PTPN2	ENSRROP00000010437	ENSRROP00000000508	ENSRROP00000010437	Tyrosine-protein phosphatase non-receptor type.	Uncharacterized protein.	0.675
PTPN6	ENSRROP00000036200	ENSRROP00000029139	ENSRROP00000036200	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Uncharacterized protein.	0.405
PTPN6	PTPN11	ENSRROP00000029139	ENSRROP00000015111	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.	0.935
PTPN7	ENSRROP00000010437	ENSRROP00000013698	ENSRROP00000010437	Protein tyrosine phosphatase non-receptor type 7.	Uncharacterized protein.	0.539