57 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC104677534	Uncharacterized protein. (285 aa)
	HIF1A	Hypoxia inducible factor 1 subunit alpha. (826 aa)
	ENSRROP00000000616	CS domain-containing protein. (136 aa)
	LOC104662276	Uncharacterized protein. (341 aa)
	HSF1	Heat shock transcription factor 1. (557 aa)
	RPS3	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (243 aa)
	ERN1	Endoplasmic reticulum to nucleus signaling 1. (980 aa)
	NOD2	Nucleotide binding oligomerization domain containing 2. (1040 aa)
	PPP5C	Serine/threonine-protein phosphatase. (499 aa)
	UNC45B	Unc-45 myosin chaperone B. (929 aa)
	TELO2	Telomere maintenance 2. (837 aa)
	UNC45A	Unc-45 myosin chaperone A. (1085 aa)
	FKBP6	Peptidylprolyl isomerase. (327 aa)
	NUP62	Nucleoporin 62. (442 aa)
	KPNB1	Karyopherin subunit beta 1. (870 aa)
	LOC104660893	Hist_deacetyl domain-containing protein. (196 aa)
	CDC37	Cell division cycle 37. (378 aa)
	AARSD1	Uncharacterized protein. (585 aa)
	STIP1	Stress induced phosphoprotein 1. (591 aa)
	LOC104662872	Uncharacterized protein. (115 aa)
	ENSRROP00000015964	CHORD domain-containing protein. (213 aa)
	SLC12A2	Solute carrier family 12 member 2. (1210 aa)
	ENSRROP00000017761	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (269 aa)
	ENSRROP00000017785	Uncharacterized protein. (348 aa)
	CDK5	Cyclin dependent kinase 5; Belongs to the protein kinase superfamily. (292 aa)
	PTGES3	CS domain-containing protein. (164 aa)
	USP19	Ubiquitin specific peptidase 19. (1421 aa)
	PACRGL	Parkin coregulated like. (248 aa)
	CHORDC1	Cysteine and histidine rich domain containing 1. (332 aa)
	CYP1A1	Cytochrome P450 family 1 subfamily A member 1; Belongs to the cytochrome P450 family. (524 aa)
	ARNTL	Aryl hydrocarbon receptor nuclear translocator like. (626 aa)
	KDR	Kinase insert domain receptor; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1356 aa)
	NPAS2	Neuronal PAS domain protein 2. (824 aa)
	ENSRROP00000026782	KH type-2 domain-containing protein. (133 aa)
	ENSRROP00000026807	TPR_REGION domain-containing protein. (373 aa)
	CYP2E1	Cytochrome P450 family 2 subfamily E member 1; Belongs to the cytochrome P450 family. (511 aa)
	STUB1	STIP1 homology and U-box containing protein 1. (303 aa)
	PPEF2	Serine/threonine-protein phosphatase with EF-hands. (752 aa)
	GUCY1B1	Guanylate cyclase 1 soluble subunit beta 1; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (642 aa)
	EIF2AK3	Eukaryotic translation initiation factor 2 alpha kinase 3. (1115 aa)
	PACRG	Parkin coregulated. (294 aa)
	CCDC39	Coiled-coil domain containing 39. (942 aa)
	LOC104668444	Ribosomal_S3_C domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (251 aa)
	ENSRROP00000032658	KH type-2 domain-containing protein. (143 aa)
	AHSA1	Activator of HSP90 ATPase activity 1. (338 aa)
	PPID	Uncharacterized protein. (373 aa)
	TSC1	TSC complex subunit 1. (1163 aa)
	ENSRROP00000038862	Protein kinase domain-containing protein. (265 aa)
	ENSRROP00000039885	Uncharacterized protein. (286 aa)
	AHSA2P	Uncharacterized protein. (141 aa)
	TSC2	TSC complex subunit 2. (1807 aa)
	KSR1	Kinase suppressor of ras 1. (922 aa)
	HDAC6	Histone deacetylase 6. (1258 aa)
	TRANK1	Tetratricopeptide repeat and ankyrin repeat containing 1. (2926 aa)
	ENSRROP00000043288	STI1 domain-containing protein. (190 aa)
	TTC4	Tetratricopeptide repeat domain 4. (387 aa)
	HDAC8	Histone deacetylase 8. (231 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARSD1	AHSA1	ENSRROP00000012386	ENSRROP00000032672	Uncharacterized protein.	Activator of HSP90 ATPase activity 1.	0.655
AARSD1	AHSA2P	ENSRROP00000012386	ENSRROP00000040437	Uncharacterized protein.	Uncharacterized protein.	0.655
AARSD1	CDC37	ENSRROP00000012386	ENSRROP00000012286	Uncharacterized protein.	Cell division cycle 37.	0.590
AARSD1	ENSRROP00000017785	ENSRROP00000012386	ENSRROP00000017785	Uncharacterized protein.	Uncharacterized protein.	0.590
AARSD1	ENSRROP00000026807	ENSRROP00000012386	ENSRROP00000026807	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.419
AARSD1	ENSRROP00000043288	ENSRROP00000012386	ENSRROP00000043288	Uncharacterized protein.	STI1 domain-containing protein.	0.630
AARSD1	FKBP6	ENSRROP00000012386	ENSRROP00000010746	Uncharacterized protein.	Peptidylprolyl isomerase.	0.518
AARSD1	LOC104662276	ENSRROP00000012386	ENSRROP00000001091	Uncharacterized protein.	Uncharacterized protein.	0.717
AARSD1	PPID	ENSRROP00000012386	ENSRROP00000033460	Uncharacterized protein.	Uncharacterized protein.	0.717
AARSD1	PPP5C	ENSRROP00000012386	ENSRROP00000007308	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.680
AARSD1	STIP1	ENSRROP00000012386	ENSRROP00000013876	Uncharacterized protein.	Stress induced phosphoprotein 1.	0.630
AARSD1	TSC1	ENSRROP00000012386	ENSRROP00000033956	Uncharacterized protein.	TSC complex subunit 1.	0.638
AARSD1	TTC4	ENSRROP00000012386	ENSRROP00000044334	Uncharacterized protein.	Tetratricopeptide repeat domain 4.	0.419
AHSA1	AARSD1	ENSRROP00000032672	ENSRROP00000012386	Activator of HSP90 ATPase activity 1.	Uncharacterized protein.	0.655
AHSA1	CDC37	ENSRROP00000032672	ENSRROP00000012286	Activator of HSP90 ATPase activity 1.	Cell division cycle 37.	0.626
AHSA1	ENSRROP00000000616	ENSRROP00000032672	ENSRROP00000000616	Activator of HSP90 ATPase activity 1.	CS domain-containing protein.	0.686
AHSA1	ENSRROP00000017785	ENSRROP00000032672	ENSRROP00000017785	Activator of HSP90 ATPase activity 1.	Uncharacterized protein.	0.478
AHSA1	ENSRROP00000043288	ENSRROP00000032672	ENSRROP00000043288	Activator of HSP90 ATPase activity 1.	STI1 domain-containing protein.	0.868
AHSA1	LOC104662276	ENSRROP00000032672	ENSRROP00000001091	Activator of HSP90 ATPase activity 1.	Uncharacterized protein.	0.778
AHSA1	LOC104662872	ENSRROP00000032672	ENSRROP00000014040	Activator of HSP90 ATPase activity 1.	Uncharacterized protein.	0.686