STRINGSTRING
DHX15 DHX15 SNRPD3 SNRPD3 SNRPB SNRPB SNRPD2 SNRPD2 SF3B2 SF3B2 ENSRROP00000020651 ENSRROP00000020651 LSM7 LSM7 ZCRB1 ZCRB1 SNRPG-2 SNRPG-2 RBM41 RBM41 SF3B6 SF3B6 LOC104657389 LOC104657389 ZMAT5 ZMAT5 ENSRROP00000007906 ENSRROP00000007906 SF3B4 SF3B4 ENSRROP00000010290 ENSRROP00000010290 LOC104672089 LOC104672089 SNRPF SNRPF SNRNP35 SNRNP35 SNRNP25 SNRNP25 RNPC3 RNPC3 ENSRROP00000044639 ENSRROP00000044639 SNRPG SNRPG CABP7 CABP7 SNRNP48 SNRNP48 LOC104677456 LOC104677456 PHF5A PHF5A ENSRROP00000026765 ENSRROP00000026765 SF3B5 SF3B5 ENSRROP00000013952 ENSRROP00000013952
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DHX15DEAH-box helicase 15. (795 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
ENSRROP00000020651Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (67 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
ZCRB1Zinc finger CCHC-type and RNA binding motif containing 1. (217 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
RBM41RNA binding motif protein 41. (413 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
LOC104657389Sm domain-containing protein. (86 aa)
ZMAT5Zinc finger matrin-type 5. (170 aa)
ENSRROP00000007906RRM domain-containing protein. (351 aa)
SF3B4Splicing factor 3b subunit 4. (424 aa)
ENSRROP00000010290Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (66 aa)
LOC104672089Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (109 aa)
SNRPFSm domain-containing protein. (127 aa)
SNRNP35Small nuclear ribonucleoprotein U11/U12 subunit 35. (251 aa)
SNRNP25Small nuclear ribonucleoprotein U11/U12 subunit 25. (132 aa)
RNPC3RNA binding region (RNP1, RRM) containing 3. (518 aa)
ENSRROP00000044639Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (72 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
CABP7Calcium binding protein 7. (215 aa)
SNRNP48Small nuclear ribonucleoprotein U11/U12 subunit 48. (339 aa)
LOC104677456RRM domain-containing protein. (446 aa)
PHF5APHD finger protein 5A. (110 aa)
ENSRROP00000026765Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
ENSRROP00000013952CCHC-type domain-containing protein. (159 aa)
Your Current Organism:
Rhinopithecus roxellana
NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey
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