STRINGSTRING
SNRNP70 SNRNP70 LSM7 LSM7 LUC7L3 LUC7L3 LUC7L LUC7L FMC1-LUC7L2 FMC1-LUC7L2 U2AF2 U2AF2 LOC104669438 LOC104669438 PRPF40A PRPF40A PRPF40B PRPF40B SNRPN SNRPN SF3A1 SF3A1 PRPF39 PRPF39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNRNP70Small nuclear ribonucleoprotein U1 subunit 70. (437 aa)
LSM7LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)
LUC7L3LUC7 like 3 pre-mRNA splicing factor. (480 aa)
LUC7LLUC7 like. (361 aa)
FMC1-LUC7L2FMC1-LUC7L2 readthrough. (448 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (414 aa)
LOC104669438U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (461 aa)
PRPF40APre-mRNA processing factor 40 homolog A. (930 aa)
PRPF40BPre-mRNA processing factor 40 homolog B. (892 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (244 aa)
SF3A1Splicing factor 3a subunit 1. (793 aa)
PRPF39Pre-mRNA processing factor 39. (669 aa)
Your Current Organism:
Rhinopithecus roxellana
NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey
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