STRINGSTRING
SMU1 SMU1 SF3B6 SF3B6 RNF113A RNF113A LOC104657389 LOC104657389 SNRPD1 SNRPD1 PRPF38B PRPF38B ENSRROP00000010290 ENSRROP00000010290 ENSRROP00000010844 ENSRROP00000010844 LSM2 LSM2 ENSRROP00000012831 ENSRROP00000012831 IK IK LOC104672089 LOC104672089 SRRM2 SRRM2 DHX16 DHX16 SNRPF SNRPF SNRPD3 SNRPD3 SNRPB2 SNRPB2 ENSRROP00000014292 ENSRROP00000014292 RNF113B RNF113B SNRPG SNRPG MTHFSD MTHFSD ENSRROP00000044639 ENSRROP00000044639 SART1 SART1 UBE2J1 UBE2J1 WBP4 WBP4 RBMX2 RBMX2 ENSRROP00000037640 ENSRROP00000037640 PRPF6 PRPF6 ENSRROP00000034505 ENSRROP00000034505 CWC27 CWC27 ENSRROP00000032718 ENSRROP00000032718 SNIP1 SNIP1 PHF5A PHF5A MFAP1 MFAP1 SNRNP200 SNRNP200 CWC22 CWC22 ENSRROP00000026765 ENSRROP00000026765 SF3B5 SF3B5 ENSRROP00000025753 ENSRROP00000025753 SNRPB SNRPB SRRM3 SRRM3 SNRPD2 SNRPD2 ENSRROP00000021355 ENSRROP00000021355 SF3B2 SF3B2 SF3A2 SF3A2 ENSRROP00000020651 ENSRROP00000020651 SF3A3 SF3A3 ENSRROP00000017857 ENSRROP00000017857 SNRPG-2 SNRPG-2 PRPF38A PRPF38A ZMAT2 ZMAT2 ENSRROP00000016405 ENSRROP00000016405 SNRPE SNRPE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SMU1SMU1 DNA replication regulator and spliceosomal factor. (513 aa)
SF3B6Splicing factor 3b subunit 6. (125 aa)
RNF113ARing finger protein 113A. (343 aa)
LOC104657389Sm domain-containing protein. (86 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (130 aa)
PRPF38BPre-mRNA processing factor 38B. (546 aa)
ENSRROP00000010290Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (66 aa)
ENSRROP00000010844SEC63 domain-containing protein. (325 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
ENSRROP00000012831Sm domain-containing protein. (82 aa)
IKIK cytokine. (585 aa)
LOC104672089Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (109 aa)
SRRM2Serine/arginine repetitive matrix 2. (2752 aa)
DHX16DEAH-box helicase 16. (1044 aa)
SNRPFSm domain-containing protein. (127 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
SNRPB2Small nuclear ribonucleoprotein polypeptide B2. (225 aa)
ENSRROP00000014292Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (85 aa)
RNF113BRing finger protein 113B. (322 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
MTHFSDMethenyltetrahydrofolate synthetase domain containing. (383 aa)
ENSRROP00000044639Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (72 aa)
SART1Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP. (800 aa)
UBE2J1Ubiquitin conjugating enzyme E2 J1. (318 aa)
WBP4WW domain binding protein 4. (375 aa)
RBMX2RNA binding motif protein X-linked 2. (327 aa)
ENSRROP00000037640RRM domain-containing protein. (317 aa)
PRPF6Pre-mRNA processing factor 6. (940 aa)
ENSRROP00000034505RRM domain-containing protein. (194 aa)
CWC27CWC27 spliceosome associated cyclophilin. (473 aa)
ENSRROP00000032718Uncharacterized protein. (286 aa)
SNIP1Smad nuclear interacting protein 1. (396 aa)
PHF5APHD finger protein 5A. (110 aa)
MFAP1Microfibril associated protein 1. (439 aa)
SNRNP200Small nuclear ribonucleoprotein U5 subunit 200. (2146 aa)
CWC22CWC22 spliceosome associated protein homolog. (907 aa)
ENSRROP00000026765Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
ENSRROP00000025753Sm domain-containing protein. (56 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
SRRM3Serine/arginine repetitive matrix 3. (545 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
ENSRROP00000021355Uncharacterized protein. (254 aa)
SF3B2Splicing factor 3b subunit 2. (895 aa)
SF3A2Splicing factor 3a subunit 2. (470 aa)
ENSRROP00000020651Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (67 aa)
SF3A3Splicing factor 3a subunit 3. (504 aa)
ENSRROP00000017857Uncharacterized protein. (67 aa)
SNRPG-2Small nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (74 aa)
PRPF38APRP38_assoc domain-containing protein. (312 aa)
ZMAT2Zinc finger matrin-type 2. (199 aa)
ENSRROP00000016405Uncharacterized protein. (413 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
Your Current Organism:
Rhinopithecus roxellana
NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey
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