54 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CLEC1B	C-type lectin domain family 1 member B. (229 aa)
	ENSRROP00000045515	Uncharacterized protein. (185 aa)
	ENSRROP00000045019	Uncharacterized protein. (182 aa)
	ENSRROP00000044328	Uncharacterized protein. (184 aa)
	ENSRROP00000044300	Uncharacterized protein. (180 aa)
	PLCG2	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1265 aa)
	PIK3CB	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta; Belongs to the PI3/PI4-kinase family. (1073 aa)
	CLNK	Cytokine dependent hematopoietic cell linker. (428 aa)
	COL1A1	Collagen type I alpha 1 chain. (1464 aa)
	PIK3R5	Phosphoinositide-3-kinase regulatory subunit 5. (879 aa)
	ENSRROP00000042123	Uncharacterized protein. (251 aa)
	COL1A2	Collagen type I alpha 2 chain. (1366 aa)
	FCER1G	Fc fragment of IgE receptor Ig. (112 aa)
	MFSD6	Major facilitator superfamily domain containing 6. (793 aa)
	RAC2	Rac family small GTPase 2. (192 aa)
	MPIG6B	Megakaryocyte and platelet inhibitory receptor G6b. (241 aa)
	PRKCZ	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (582 aa)
	ENSRROP00000036200	Uncharacterized protein. (491 aa)
	CDC42	Uncharacterized protein. (191 aa)
	PRDM2	PR/SET domain 2. (1519 aa)
	SPNS3	Sphingolipid transporter 3 (putative). (512 aa)
	PIK3R3	Phosphoinositide-3-kinase regulatory subunit 3. (461 aa)
	PTPN6	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (623 aa)
	LCP2	Lymphocyte cytosolic protein 2. (533 aa)
	ENSRROP00000024190	Protein kinase domain-containing protein. (137 aa)
	VAV3	Uncharacterized protein. (287 aa)
	PIK3R1	Phosphoinositide-3-kinase regulatory subunit 1. (724 aa)
	ENSRROP00000021422	Uncharacterized protein. (534 aa)
	SPNS1	Sphingolipid transporter 1 (putative). (528 aa)
	SYK	Tyrosine-protein kinase. (635 aa)
	FYN	Tyrosine-protein kinase. (537 aa)
	PDPN	Podoplanin. (220 aa)
	PIK3CG	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma; Belongs to the PI3/PI4-kinase family. (1102 aa)
	RHOA	Ras homolog family member A. (193 aa)
	ENSRROP00000015288	DH domain-containing protein. (263 aa)
	PTPN11	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (593 aa)
	VAV2	Vav guanine nucleotide exchange factor 2. (810 aa)
	ENSRROP00000013905	Uncharacterized protein. (135 aa)
	LCK	Tyrosine-protein kinase. (561 aa)
	VAV1	Vav guanine nucleotide exchange factor 1. (845 aa)
	PIK3CA	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	ENSRROP00000011759	Uncharacterized protein. (274 aa)
	PIK3R6	Phosphoinositide-3-kinase regulatory subunit 6. (464 aa)
	ENSRROP00000010437	Uncharacterized protein. (235 aa)
	LAT	Linker for activation of T cells. (270 aa)
	RHOB	Ras homolog family member B. (196 aa)
	GP6	Glycoprotein VI platelet. (527 aa)
	PIK3R2	Uncharacterized protein. (647 aa)
	LYN	Tyrosine-protein kinase. (491 aa)
	CLEC9A	C-type lectin domain containing 9A. (241 aa)
	ENSRROP00000004479	Uncharacterized protein. (191 aa)
	RHOG	Uncharacterized protein. (191 aa)
	PDPK1	3-phosphoinositide dependent protein kinase 1. (356 aa)
	MFSD6L	Major facilitator superfamily domain containing 6 like. (586 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC42	ENSRROP00000015288	ENSRROP00000035347	ENSRROP00000015288	Uncharacterized protein.	DH domain-containing protein.	0.510
CDC42	FYN	ENSRROP00000035347	ENSRROP00000018822	Uncharacterized protein.	Tyrosine-protein kinase.	0.939
CDC42	PIK3CA	ENSRROP00000035347	ENSRROP00000011898	Uncharacterized protein.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.949
CDC42	PIK3CB	ENSRROP00000035347	ENSRROP00000043600	Uncharacterized protein.	Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta; Belongs to the PI3/PI4-kinase family.	0.972
CDC42	PIK3R1	ENSRROP00000035347	ENSRROP00000021473	Uncharacterized protein.	Phosphoinositide-3-kinase regulatory subunit 1.	0.948
CDC42	PIK3R2	ENSRROP00000035347	ENSRROP00000007049	Uncharacterized protein.	Uncharacterized protein.	0.423
CDC42	PIK3R3	ENSRROP00000035347	ENSRROP00000030829	Uncharacterized protein.	Phosphoinositide-3-kinase regulatory subunit 3.	0.934
CDC42	PRKCZ	ENSRROP00000035347	ENSRROP00000039067	Uncharacterized protein.	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.	0.948
CDC42	RAC2	ENSRROP00000035347	ENSRROP00000039578	Uncharacterized protein.	Rac family small GTPase 2.	0.938
CDC42	RHOA	ENSRROP00000035347	ENSRROP00000015417	Uncharacterized protein.	Ras homolog family member A.	0.944
CDC42	RHOB	ENSRROP00000035347	ENSRROP00000007726	Uncharacterized protein.	Ras homolog family member B.	0.427
CDC42	VAV1	ENSRROP00000035347	ENSRROP00000013236	Uncharacterized protein.	Vav guanine nucleotide exchange factor 1.	0.961
CDC42	VAV2	ENSRROP00000035347	ENSRROP00000014020	Uncharacterized protein.	Vav guanine nucleotide exchange factor 2.	0.954
CDC42	VAV3	ENSRROP00000035347	ENSRROP00000022407	Uncharacterized protein.	Uncharacterized protein.	0.948
CLEC1B	FCER1G	ENSRROP00000037865	ENSRROP00000041477	C-type lectin domain family 1 member B.	Fc fragment of IgE receptor Ig.	0.445
CLEC1B	GP6	ENSRROP00000037865	ENSRROP00000007172	C-type lectin domain family 1 member B.	Glycoprotein VI platelet.	0.596
CLEC1B	LCP2	ENSRROP00000037865	ENSRROP00000026588	C-type lectin domain family 1 member B.	Lymphocyte cytosolic protein 2.	0.621
CLEC1B	MPIG6B	ENSRROP00000037865	ENSRROP00000039427	C-type lectin domain family 1 member B.	Megakaryocyte and platelet inhibitory receptor G6b.	0.452
CLEC1B	PLCG2	ENSRROP00000037865	ENSRROP00000044220	C-type lectin domain family 1 member B.	1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades.	0.549
CLEC1B	PRDM2	ENSRROP00000037865	ENSRROP00000035175	C-type lectin domain family 1 member B.	PR/SET domain 2.	0.765