20 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HPGDS	Hematopoietic prostaglandin D synthase. (199 aa)
	PTGIS	Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family. (500 aa)
	PTGES2	Prostaglandin E synthase 2. (377 aa)
	PTGS2	Prostaglandin-endoperoxide synthase 2. (604 aa)
	TBXAS1	Thromboxane A synthase 1; Belongs to the cytochrome P450 family. (580 aa)
	CYP8B1	Cytochrome P450 family 8 subfamily B member 1; Belongs to the cytochrome P450 family. (496 aa)
	PTGES	Prostaglandin E synthase. (152 aa)
	LOC104674029	Uncharacterized protein. (211 aa)
	PRXL2B	Peroxiredoxin like 2B. (227 aa)
	AARSD1	Uncharacterized protein. (585 aa)
	LOC104662872	Uncharacterized protein. (115 aa)
	PTGES3	CS domain-containing protein. (164 aa)
	PTGR2	Uncharacterized protein. (351 aa)
	AKR1C3	Aldo-keto reductase family 1 member C3. (323 aa)
	PTGDS	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (190 aa)
	HPGD	15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)
	PRXL2A	Peroxiredoxin like 2A. (229 aa)
	PRXL2C	Uncharacterized protein. (226 aa)
	PTGS1	Prostaglandin-endoperoxide synthase 1. (609 aa)
	ENSRROP00000000616	CS domain-containing protein. (136 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AARSD1	PTGES2	ENSRROP00000012386	ENSRROP00000035491	Uncharacterized protein.	Prostaglandin E synthase 2.	0.742
ENSRROP00000000616	PTGES	ENSRROP00000000616	ENSRROP00000007264	CS domain-containing protein.	Prostaglandin E synthase.	0.400
ENSRROP00000000616	PTGES2	ENSRROP00000000616	ENSRROP00000035491	CS domain-containing protein.	Prostaglandin E synthase 2.	0.400
HPGDS	PTGDS	ENSRROP00000001303	ENSRROP00000025628	Hematopoietic prostaglandin D synthase.	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	0.956
HPGDS	PTGES	ENSRROP00000001303	ENSRROP00000007264	Hematopoietic prostaglandin D synthase.	Prostaglandin E synthase.	0.928
HPGDS	PTGES2	ENSRROP00000001303	ENSRROP00000035491	Hematopoietic prostaglandin D synthase.	Prostaglandin E synthase 2.	0.931
HPGDS	PTGES3	ENSRROP00000001303	ENSRROP00000019629	Hematopoietic prostaglandin D synthase.	CS domain-containing protein.	0.918
HPGDS	PTGIS	ENSRROP00000001303	ENSRROP00000040022	Hematopoietic prostaglandin D synthase.	Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family.	0.930
HPGDS	PTGS2	ENSRROP00000001303	ENSRROP00000033580	Hematopoietic prostaglandin D synthase.	Prostaglandin-endoperoxide synthase 2.	0.921
LOC104662872	PTGES	ENSRROP00000014040	ENSRROP00000007264	Uncharacterized protein.	Prostaglandin E synthase.	0.400
LOC104662872	PTGES2	ENSRROP00000014040	ENSRROP00000035491	Uncharacterized protein.	Prostaglandin E synthase 2.	0.400
LOC104674029	PRXL2A	ENSRROP00000008115	ENSRROP00000029012	Uncharacterized protein.	Peroxiredoxin like 2A.	0.444
PRXL2A	LOC104674029	ENSRROP00000029012	ENSRROP00000008115	Peroxiredoxin like 2A.	Uncharacterized protein.	0.444
PRXL2A	PRXL2C	ENSRROP00000029012	ENSRROP00000026360	Peroxiredoxin like 2A.	Uncharacterized protein.	0.444
PRXL2C	PRXL2A	ENSRROP00000026360	ENSRROP00000029012	Uncharacterized protein.	Peroxiredoxin like 2A.	0.444
PTGDS	HPGDS	ENSRROP00000025628	ENSRROP00000001303	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Hematopoietic prostaglandin D synthase.	0.956
PTGDS	PTGES	ENSRROP00000025628	ENSRROP00000007264	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Prostaglandin E synthase.	0.926
PTGDS	PTGES2	ENSRROP00000025628	ENSRROP00000035491	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Prostaglandin E synthase 2.	0.923
PTGDS	PTGES3	ENSRROP00000025628	ENSRROP00000019629	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	CS domain-containing protein.	0.911
PTGDS	PTGIS	ENSRROP00000025628	ENSRROP00000040022	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family.	Prostacyclin synthase; Catalyzes the isomerization of prostaglandin H2 to prostacyclin (= prostaglandin I2); Belongs to the cytochrome P450 family.	0.922