39 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NR2C1	Nuclear receptor subfamily 2 group C member 1. (604 aa)
	THRA	Thyroid hormone receptor alpha. (590 aa)
	NR1I2	Nuclear receptor subfamily 1 group I member 2. (473 aa)
	NR3C1	Nuclear receptor subfamily 3 group C member 1. (778 aa)
	THRB	Thyroid hormone receptor beta. (476 aa)
	PIAS1	Protein inhibitor of activated STAT 1. (653 aa)
	ENSRROP00000014234	Uncharacterized protein. (63 aa)
	PPARA	Peroxisome proliferator activated receptor alpha. (398 aa)
	LOC104668178	Uncharacterized protein. (392 aa)
	SUMO2-2	Small ubiquitin-related modifier. (95 aa)
	PIAS4	Protein inhibitor of activated STAT 4. (529 aa)
	RARA	Retinoic acid receptor alpha. (478 aa)
	SUMO2	Small ubiquitin-related modifier. (94 aa)
	VTCN1	V-set domain containing T cell activation inhibitor 1. (285 aa)
	ENSRROP00000041057	Small ubiquitin-related modifier. (122 aa)
	UBE2I	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family. (231 aa)
	LOC104664457	Uncharacterized protein. (72 aa)
	RORA	RAR related orphan receptor A. (555 aa)
	NR5A1	Nuclear receptor subfamily 5 group A member 1. (461 aa)
	ENSRROP00000043101	Ig-like domain-containing protein. (244 aa)
	PPARG	Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (505 aa)
	LOC104678360	Nuclear receptor domain-containing protein. (231 aa)
	ENSRROP00000044797	Ubiquitin-like domain-containing protein. (136 aa)
	NR1H3	Nuclear receptor subfamily 1 group H member 3. (511 aa)
	SUMO1	Ubiquitin-like domain-containing protein. (145 aa)
	PGR	Progesterone receptor. (917 aa)
	NR4A2	Nuclear receptor subfamily 4 group A member 2. (609 aa)
	NR3C2	Nuclear receptor subfamily 3 group C member 2. (984 aa)
	HDAC4	Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1085 aa)
	PIAS3	Protein inhibitor of activated STAT 3. (634 aa)
	AR	Uncharacterized protein. (523 aa)
	NR5A2	Nuclear receptor subfamily 5 group A member 2. (538 aa)
	VDR	Vitamin D receptor. (477 aa)
	ENSRROP00000033278	Uncharacterized protein. (72 aa)
	NR1H2	Nuclear receptor subfamily 1 group H member 2. (461 aa)
	NR1H4	Nuclear receptor subfamily 1 group H member 4. (486 aa)
	ENSRROP00000038566	Rad60-SLD domain-containing protein. (81 aa)
	PIAS2	Protein inhibitor of activated STAT 2. (620 aa)
	RXRA	Retinoid X receptor alpha. (481 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AR	LOC104668178	ENSRROP00000025864	ENSRROP00000015607	Uncharacterized protein.	Uncharacterized protein.	0.484
AR	LOC104678360	ENSRROP00000025864	ENSRROP00000044141	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.574
AR	NR3C1	ENSRROP00000025864	ENSRROP00000008135	Uncharacterized protein.	Nuclear receptor subfamily 3 group C member 1.	0.588
AR	NR3C2	ENSRROP00000025864	ENSRROP00000021031	Uncharacterized protein.	Nuclear receptor subfamily 3 group C member 2.	0.519
AR	PGR	ENSRROP00000025864	ENSRROP00000022729	Uncharacterized protein.	Progesterone receptor.	0.656
AR	PIAS1	ENSRROP00000025864	ENSRROP00000009499	Uncharacterized protein.	Protein inhibitor of activated STAT 1.	0.512
AR	PIAS2	ENSRROP00000025864	ENSRROP00000038614	Uncharacterized protein.	Protein inhibitor of activated STAT 2.	0.456
AR	PIAS3	ENSRROP00000025864	ENSRROP00000024571	Uncharacterized protein.	Protein inhibitor of activated STAT 3.	0.400
AR	UBE2I	ENSRROP00000025864	ENSRROP00000041726	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.482
ENSRROP00000014234	ENSRROP00000038566	ENSRROP00000014234	ENSRROP00000038566	Uncharacterized protein.	Rad60-SLD domain-containing protein.	0.452
ENSRROP00000014234	ENSRROP00000041057	ENSRROP00000014234	ENSRROP00000041057	Uncharacterized protein.	Small ubiquitin-related modifier.	0.452
ENSRROP00000014234	PIAS1	ENSRROP00000014234	ENSRROP00000009499	Uncharacterized protein.	Protein inhibitor of activated STAT 1.	0.652
ENSRROP00000014234	PIAS2	ENSRROP00000014234	ENSRROP00000038614	Uncharacterized protein.	Protein inhibitor of activated STAT 2.	0.651
ENSRROP00000014234	PIAS3	ENSRROP00000014234	ENSRROP00000024571	Uncharacterized protein.	Protein inhibitor of activated STAT 3.	0.649
ENSRROP00000014234	PIAS4	ENSRROP00000014234	ENSRROP00000017132	Uncharacterized protein.	Protein inhibitor of activated STAT 4.	0.703
ENSRROP00000014234	SUMO1	ENSRROP00000014234	ENSRROP00000023229	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.452
ENSRROP00000014234	UBE2I	ENSRROP00000014234	ENSRROP00000041726	Uncharacterized protein.	Ubiquitin conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.	0.845
ENSRROP00000033278	ENSRROP00000038566	ENSRROP00000033278	ENSRROP00000038566	Uncharacterized protein.	Rad60-SLD domain-containing protein.	0.452
ENSRROP00000033278	ENSRROP00000041057	ENSRROP00000033278	ENSRROP00000041057	Uncharacterized protein.	Small ubiquitin-related modifier.	0.515
ENSRROP00000033278	PIAS1	ENSRROP00000033278	ENSRROP00000009499	Uncharacterized protein.	Protein inhibitor of activated STAT 1.	0.666