47 items (Rhinopithecus roxellana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HNF4G	Hepatocyte nuclear factor 4 gamma. (445 aa)
	THRA	Thyroid hormone receptor alpha. (590 aa)
	NR2E3	Nuclear receptor subfamily 2 group E member 3. (410 aa)
	RXRG	Retinoid X receptor gamma. (463 aa)
	NR1D1	Nuclear receptor subfamily 1 group D member 1. (613 aa)
	NR1I2	Nuclear receptor subfamily 1 group I member 2. (473 aa)
	NR3C1	Nuclear receptor subfamily 3 group C member 1. (778 aa)
	NR4A1	Nuclear receptor subfamily 4 group A member 1. (670 aa)
	THRB	Thyroid hormone receptor beta. (476 aa)
	NR1D2	Nuclear receptor subfamily 1 group D member 2. (578 aa)
	PPARD	Peroxisome proliferator activated receptor delta. (441 aa)
	NR6A1	Nuclear receptor subfamily 6 group A member 1. (480 aa)
	HNF4A	Hepatocyte nuclear factor 4 alpha. (474 aa)
	PPARA	Peroxisome proliferator activated receptor alpha. (398 aa)
	LOC104668178	Uncharacterized protein. (392 aa)
	RARA	Retinoic acid receptor alpha. (478 aa)
	NR2F1	Nuclear receptor subfamily 2 group F member 1. (423 aa)
	NR2F6	Nuclear receptor subfamily 2 group F member 6. (386 aa)
	ESRRB	Estrogen related receptor beta. (500 aa)
	NR1I3	Nuclear receptor subfamily 1 group I member 3. (353 aa)
	NR3C2	Nuclear receptor subfamily 3 group C member 2. (984 aa)
	NR4A2	Nuclear receptor subfamily 4 group A member 2. (609 aa)
	RARG	Retinoic acid receptor gamma. (456 aa)
	PGR	Progesterone receptor. (917 aa)
	NR5A2	Nuclear receptor subfamily 5 group A member 2. (538 aa)
	VDR	Vitamin D receptor. (477 aa)
	ESRRG	Estrogen related receptor gamma. (470 aa)
	RORB	RAR related orphan receptor B. (475 aa)
	ESRRA	Estrogen related receptor alpha. (422 aa)
	ESR2	Estrogen receptor 2. (530 aa)
	RARB	Retinoic acid receptor beta. (448 aa)
	NR1H2	Nuclear receptor subfamily 1 group H member 2. (461 aa)
	NR1H4	Nuclear receptor subfamily 1 group H member 4. (486 aa)
	RORC	RAR related orphan receptor C. (519 aa)
	RXRB	Retinoid X receptor beta. (542 aa)
	NR2C2	Nuclear receptor subfamily 2 group C member 2. (629 aa)
	RXRA	Retinoid X receptor alpha. (481 aa)
	NR4A3	Nuclear receptor subfamily 4 group A member 3. (637 aa)
	RORA	RAR related orphan receptor A. (555 aa)
	NR5A1	Nuclear receptor subfamily 5 group A member 1. (461 aa)
	NR2E1	Nuclear receptor subfamily 2 group E member 1. (421 aa)
	PPARG	Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...] (505 aa)
	LOC104678360	Nuclear receptor domain-containing protein. (231 aa)
	NR1H3	Nuclear receptor subfamily 1 group H member 3. (511 aa)
	NR2C1	Nuclear receptor subfamily 2 group C member 1. (604 aa)
	NR2F2	Nuclear receptor subfamily 2 group F member 2. (414 aa)
	ENSRROP00000045774	Uncharacterized protein. (388 aa)

Your Current Organism:

Rhinopithecus roxellana

NCBI taxonomy Id: 61622
Other names: Pygathrix roxellana, R. roxellana, golden snub-nosed monkey

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSRROP00000045774	ESRRB	ENSRROP00000045774	ENSRROP00000020231	Uncharacterized protein.	Estrogen related receptor beta.	0.495
ENSRROP00000045774	ESRRG	ENSRROP00000045774	ENSRROP00000029037	Uncharacterized protein.	Estrogen related receptor gamma.	0.617
ENSRROP00000045774	PPARG	ENSRROP00000045774	ENSRROP00000043597	Uncharacterized protein.	Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...]	0.443
ESR2	LOC104678360	ENSRROP00000032391	ENSRROP00000044141	Estrogen receptor 2.	Nuclear receptor domain-containing protein.	0.993
ESR2	NR5A1	ENSRROP00000032391	ENSRROP00000042750	Estrogen receptor 2.	Nuclear receptor subfamily 5 group A member 1.	0.438
ESR2	NR5A2	ENSRROP00000032391	ENSRROP00000026486	Estrogen receptor 2.	Nuclear receptor subfamily 5 group A member 2.	0.438
ESR2	PGR	ENSRROP00000032391	ENSRROP00000022729	Estrogen receptor 2.	Progesterone receptor.	0.835
ESRRA	ESRRB	ENSRROP00000031891	ENSRROP00000020231	Estrogen related receptor alpha.	Estrogen related receptor beta.	0.490
ESRRA	ESRRG	ENSRROP00000031891	ENSRROP00000029037	Estrogen related receptor alpha.	Estrogen related receptor gamma.	0.613
ESRRA	PPARG	ENSRROP00000031891	ENSRROP00000043597	Estrogen related receptor alpha.	Peroxisome proliferator-activated receptor gamma; Nuclear receptor that binds peroxisome proliferators such as hypolipidemic drugs and fatty acids. Once activated by a ligand, the nuclear receptor binds to DNA specific PPAR response elements (PPRE) and modulates the transcription of its target genes, such as acyl-CoA oxidase. It therefore controls the peroxisomal beta-oxidation pathway of fatty acids. Key regulator of adipocyte differentiation and glucose homeostasis. ARF6 acts as a key regulator of the tissue-specific adipocyte P2 (aP2) enhancer. Acts as a critical regulator of gut ho [...]	0.443
ESRRB	ENSRROP00000045774	ENSRROP00000020231	ENSRROP00000045774	Estrogen related receptor beta.	Uncharacterized protein.	0.495
ESRRB	ESRRA	ENSRROP00000020231	ENSRROP00000031891	Estrogen related receptor beta.	Estrogen related receptor alpha.	0.490
ESRRG	ENSRROP00000045774	ENSRROP00000029037	ENSRROP00000045774	Estrogen related receptor gamma.	Uncharacterized protein.	0.617
ESRRG	ESRRA	ENSRROP00000029037	ENSRROP00000031891	Estrogen related receptor gamma.	Estrogen related receptor alpha.	0.613
HNF4A	NR1H4	ENSRROP00000012114	ENSRROP00000033635	Hepatocyte nuclear factor 4 alpha.	Nuclear receptor subfamily 1 group H member 4.	0.527
HNF4A	NR1I2	ENSRROP00000012114	ENSRROP00000007116	Hepatocyte nuclear factor 4 alpha.	Nuclear receptor subfamily 1 group I member 2.	0.412
HNF4G	NR1H4	ENSRROP00000007532	ENSRROP00000033635	Hepatocyte nuclear factor 4 gamma.	Nuclear receptor subfamily 1 group H member 4.	0.435
LOC104668178	LOC104678360	ENSRROP00000015607	ENSRROP00000044141	Uncharacterized protein.	Nuclear receptor domain-containing protein.	0.574
LOC104668178	NR3C1	ENSRROP00000015607	ENSRROP00000008135	Uncharacterized protein.	Nuclear receptor subfamily 3 group C member 1.	0.523
LOC104668178	NR3C2	ENSRROP00000015607	ENSRROP00000021031	Uncharacterized protein.	Nuclear receptor subfamily 3 group C member 2.	0.519