STRINGSTRING
bglF_3 bglF_3 AML55853.1 AML55853.1 AML58079.1 AML58079.1 AML58589.1 AML58589.1 nagK nagK nagZ nagZ chb_1 chb_1 ptsG_2 ptsG_2 chiD chiD AML59693.1 AML59693.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
bglF_3PTS system, beta-glucoside-specific IIB component. (626 aa)
AML55853.1Beta-hexosaminidase. (796 aa)
AML58079.1Hypothetical protein. (609 aa)
AML58589.1Hypothetical protein. (90 aa)
nagKN-acetyl-D-glucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P. (304 aa)
nagZBeta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (345 aa)
chb_1Beta-hexosaminidase. (887 aa)
ptsG_2PTS system, N-acetylglucosamine-specific IIA component. (662 aa)
chiDChitinase; Belongs to the glycosyl hydrolase 18 family. (330 aa)
AML59693.1Hypothetical protein. (51 aa)
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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