STRINGSTRING
AML59282.1 AML59282.1 bglX_1 bglX_1 chb_1 chb_1 chiD chiD nagZ nagZ malL malL AML58247.1 AML58247.1 AML58079.1 AML58079.1 bglA bglA gmuD_1 gmuD_1 yicI yicI gmuD_2 gmuD_2 malQ malQ treA treA AML55853.1 AML55853.1 bglH_3 bglH_3 tvaI_2 tvaI_2 lacZ_1 lacZ_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AML59282.1Hypothetical protein. (465 aa)
bglX_1Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family. (765 aa)
chb_1Beta-hexosaminidase. (887 aa)
chiDChitinase; Belongs to the glycosyl hydrolase 18 family. (330 aa)
nagZBeta N-acetyl-glucosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. (345 aa)
malLAlpha-glucosidase. (551 aa)
AML58247.1Putative exported alpha-N-acetylgalactosaminidase. (629 aa)
AML58079.1Hypothetical protein. (609 aa)
bglA6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (476 aa)
gmuD_1Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (463 aa)
yicIAlpha-glucosidase; Belongs to the glycosyl hydrolase 31 family. (787 aa)
gmuD_2Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (475 aa)
malQ4-alpha-glucanotransferase (amylomaltase). (695 aa)
treATrehalose-6-phosphate hydrolase. (554 aa)
AML55853.1Beta-hexosaminidase. (796 aa)
bglH_36-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family. (465 aa)
tvaI_2Maltodextrin glucosidase. (606 aa)
lacZ_1Beta-galactosidase. (1027 aa)
Your Current Organism:
Serratia rubidaea
NCBI taxonomy Id: 61652
Other names: ATCC 27593, CCUG 10981, CCUG 9286, CIP 103234, DSM 4480, LMG 5019, LMG:5019, NBRC 103169, NCTC 12971, S. rubidaea, Serratia marinorubra, Serratia sp. V1E5a
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