(18 nodes) Sm domain, eukaryotic/archaea-type network (Schistosoma mansoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A5K4ET12	U6 snRNA-associated Sm-like protein LSm4. (128 aa)
	Smp_068420	Small nuclear ribonucleoprotein Sm D3. (130 aa)
	Smp_075560	Small nuclear ribonucleoprotein Sm D2. (124 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (87 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (142 aa)
	Smp_026770	Putative small nuclear ribonucleoprotein-associated protein. (199 aa)
	Smp_038680	Small nuclear ribonucleoprotein G. (76 aa)
	Smp_060910	Putative small nuclear ribonucleoprotein f (Snrnp-f). (84 aa)
	LSM3	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (103 aa)
	Smp_210830	Family S9 non-peptidase homologue (S09 family). (105 aa)
	A0A5K4F7H8	Uncharacterized protein. (78 aa)
	A0A5K4F766	Uncharacterized protein. (98 aa)
	A0A5K4F1Z7	Uncharacterized protein. (204 aa)
	A0A3Q0KUZ7	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (89 aa)
	LSM8	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
	A0A3Q0KR89	Sm domain-containing protein. (284 aa)
	LSM1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (138 aa)
	A0A3Q0KDL8	Putative small nuclear ribonucleoprotein-associated protein. (179 aa)

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q0KDL8	A0A3Q0KUZ7	A0A3Q0KDL8	A0A3Q0KUZ7	Putative small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.984
A0A3Q0KDL8	A0A5K4ET12	A0A3Q0KDL8	A0A5K4ET12	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm4.	0.873
A0A3Q0KDL8	A0A5K4F766	A0A3Q0KDL8	A0A5K4F766	Putative small nuclear ribonucleoprotein-associated protein.	Uncharacterized protein.	0.950
A0A3Q0KDL8	A0A5K4F7H8	A0A3Q0KDL8	A0A5K4F7H8	Putative small nuclear ribonucleoprotein-associated protein.	Uncharacterized protein.	0.938
A0A3Q0KDL8	LSM1	A0A3Q0KDL8	A0A3Q0KFD4	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.647
A0A3Q0KDL8	LSM3	A0A3Q0KDL8	G4V9Z3	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.953
A0A3Q0KDL8	LSM4	A0A3Q0KDL8	G4VPB2	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.873
A0A3Q0KDL8	LSM5	A0A3Q0KDL8	G4VS32	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.947
A0A3Q0KDL8	LSM8	A0A3Q0KDL8	A0A3Q0KTE3	Putative small nuclear ribonucleoprotein-associated protein.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.946
A0A3Q0KDL8	Smp_038680	A0A3Q0KDL8	G4VI89	Putative small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein G.	0.979
A0A3Q0KDL8	Smp_060910	A0A3Q0KDL8	G4VBP6	Putative small nuclear ribonucleoprotein-associated protein.	Putative small nuclear ribonucleoprotein f (Snrnp-f).	0.982
A0A3Q0KDL8	Smp_068420	A0A3Q0KDL8	Q4JHT3	Putative small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D3.	0.983
A0A3Q0KDL8	Smp_075560	A0A3Q0KDL8	G4VT90	Putative small nuclear ribonucleoprotein-associated protein.	Small nuclear ribonucleoprotein Sm D2.	0.984
A0A3Q0KDL8	Smp_210830	A0A3Q0KDL8	G4V8R6	Putative small nuclear ribonucleoprotein-associated protein.	Family S9 non-peptidase homologue (S09 family).	0.954
A0A3Q0KUZ7	A0A3Q0KDL8	A0A3Q0KUZ7	A0A3Q0KDL8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Putative small nuclear ribonucleoprotein-associated protein.	0.984
A0A3Q0KUZ7	A0A5K4ET12	A0A3Q0KUZ7	A0A5K4ET12	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm4.	0.965
A0A3Q0KUZ7	A0A5K4F766	A0A3Q0KUZ7	A0A5K4F766	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.995
A0A3Q0KUZ7	A0A5K4F7H8	A0A3Q0KUZ7	A0A5K4F7H8	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	Uncharacterized protein.	0.992
A0A3Q0KUZ7	LSM1	A0A3Q0KUZ7	A0A3Q0KFD4	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.854
A0A3Q0KUZ7	LSM3	A0A3Q0KUZ7	G4V9Z3	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996