(23 nodes) AAA ATPase, AAA+ lid domain network (Schistosoma mansoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A5K4F1W8	Uncharacterized protein. (562 aa)
	Smp_018240.3	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (803 aa)
	Smp_042270.2	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family. (428 aa)
	Smp_012470	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family. (433 aa)
	Smp_072340	Putative 26s protease regulatory subunit 6b; Belongs to the AAA ATPase family. (415 aa)
	KATNA1	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation. (524 aa)
	Smp_057320	Putative vesicular-fusion protein nsf. (743 aa)
	Smp_025510	Putative skd/vacuolar sorting; Belongs to the AAA ATPase family. (433 aa)
	Smp_017070	Putative 26s protease regulatory subunit S10b; Belongs to the AAA ATPase family. (395 aa)
	YME1_SCHMA	ATP-dependent zinc metalloprotease YME1 homolog; Putative ATP-dependent protease; In the N-terminal section; belongs to the AAA ATPase family. (662 aa)
	A0A3Q0KCW9	Paraplegin (M41 family). (745 aa)
	A0A3Q0KF02	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family. (412 aa)
	A0A3Q0KG66	AAA domain-containing protein; Belongs to the AAA ATPase family. (626 aa)
	A0A3Q0KKA3	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family. (430 aa)
	KATNAL2	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. (531 aa)
	A0A3Q0KS05	Afg3-like protein 2 (M41 family). (733 aa)
	A0A3Q0KT73	26S protease regulatory subunit, putative; Belongs to the AAA ATPase family. (433 aa)
	A0A3Q0KTT6	Bromo domain-containing protein. (1638 aa)
	A0A5K4EAH6	Paraplegin (M41 family). (571 aa)
	A0A5K4EAI9	Putative 26s protease regulatory subunit S10b. (288 aa)
	A0A5K4EZA5	Uncharacterized protein. (1586 aa)
	A0A5K4F1N5	Uncharacterized protein. (445 aa)
	RPT4	26S proteasome subunit ATPase 4; Belongs to the AAA ATPase family. (407 aa)

Your Current Organism:

Schistosoma mansoni

NCBI taxonomy Id: 6183
Other names: S. mansoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A3Q0KCW9	A0A3Q0KG66	A0A3Q0KCW9	A0A3Q0KG66	Paraplegin (M41 family).	AAA domain-containing protein; Belongs to the AAA ATPase family.	0.404
A0A3Q0KCW9	YME1_SCHMA	A0A3Q0KCW9	P46508	Paraplegin (M41 family).	ATP-dependent zinc metalloprotease YME1 homolog; Putative ATP-dependent protease; In the N-terminal section; belongs to the AAA ATPase family.	0.409
A0A3Q0KF02	A0A3Q0KKA3	A0A3Q0KF02	A0A3Q0KKA3	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	0.995
A0A3Q0KF02	A0A3Q0KT73	A0A3Q0KF02	A0A3Q0KT73	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	26S protease regulatory subunit, putative; Belongs to the AAA ATPase family.	0.984
A0A3Q0KF02	A0A3Q0KTT6	A0A3Q0KF02	A0A3Q0KTT6	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Bromo domain-containing protein.	0.585
A0A3Q0KF02	A0A5K4EAI9	A0A3Q0KF02	A0A5K4EAI9	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit S10b.	0.939
A0A3Q0KF02	A0A5K4EZA5	A0A3Q0KF02	A0A5K4EZA5	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.585
A0A3Q0KF02	KATNA1	A0A3Q0KF02	G4VB10	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A1; Catalytic subunit of a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.	0.589
A0A3Q0KF02	KATNAL2	A0A3Q0KF02	A0A3Q0KNA7	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.	0.845
A0A3Q0KF02	RPT4	A0A3Q0KF02	A9NI53	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	26S proteasome subunit ATPase 4; Belongs to the AAA ATPase family.	0.984
A0A3Q0KF02	Smp_012470	A0A3Q0KF02	G4V969	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	0.995
A0A3Q0KF02	Smp_017070	A0A3Q0KF02	G4VTJ6	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit S10b; Belongs to the AAA ATPase family.	0.940
A0A3Q0KF02	Smp_018240.3	A0A3Q0KF02	G4M0P7	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.	0.744
A0A3Q0KF02	Smp_072340	A0A3Q0KF02	G4V9B5	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit 6b; Belongs to the AAA ATPase family.	0.993
A0A3Q0KG66	A0A3Q0KCW9	A0A3Q0KG66	A0A3Q0KCW9	AAA domain-containing protein; Belongs to the AAA ATPase family.	Paraplegin (M41 family).	0.404
A0A3Q0KG66	A0A3Q0KS05	A0A3Q0KG66	A0A3Q0KS05	AAA domain-containing protein; Belongs to the AAA ATPase family.	Afg3-like protein 2 (M41 family).	0.452
A0A3Q0KKA3	A0A3Q0KF02	A0A3Q0KKA3	A0A3Q0KF02	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	26S protease regulatory subunit 6a, putative; Belongs to the AAA ATPase family.	0.995
A0A3Q0KKA3	A0A3Q0KT73	A0A3Q0KKA3	A0A3Q0KT73	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	26S protease regulatory subunit, putative; Belongs to the AAA ATPase family.	0.996
A0A3Q0KKA3	A0A5K4EAI9	A0A3Q0KKA3	A0A5K4EAI9	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	Putative 26s protease regulatory subunit S10b.	0.974
A0A3Q0KKA3	RPT4	A0A3Q0KKA3	A9NI53	Putative 26s protease regulatory subunit; Belongs to the AAA ATPase family.	26S proteasome subunit ATPase 4; Belongs to the AAA ATPase family.	0.996