13 items (Schistosoma haematobium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MS3_03609	Centrin-1. (76 aa)
	MS3_06267	Guanine nucleotide-binding protein subunit alpha-12. (440 aa)
	MS3_06570	Guanine nucleotide-binding protein subunit alpha-14. (114 aa)
	MS3_07317	Guanine nucleotide-binding protein G(S) subunit alpha. (358 aa)
	MS3_02039	Guanine nucleotide-binding protein G(S) subunit alpha. (563 aa)
	MS3_03293	Uncharacterized protein. (484 aa)
	MS3_04373	Guanine nucleotide-binding protein G(Q) subunit alpha. (294 aa)
	MS3_08102	Centrin-3. (162 aa)
	MS3_06854	Guanine nucleotide-binding protein G(I) subunit alpha. (369 aa)
	MS3_00187	Guanine nucleotide-binding protein G(O) subunit alpha. (355 aa)
	MS3_00046	Guanine nucleotide-binding protein G(I) subunit alpha. (273 aa)
	MS3_03287	Guanine nucleotide-binding protein subunit alpha-14. (220 aa)
	MS3_05754	Guanine nucleotide-binding protein G(Q) subunit alpha. (353 aa)

Your Current Organism:

Schistosoma haematobium

NCBI taxonomy Id: 6185
Other names: S. haematobium

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MS3_00046	MS3_02039	A0A094ZCC5	A0A094ZIQ6	Guanine nucleotide-binding protein G(I) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.560
MS3_00046	MS3_07317	A0A094ZCC5	A0A095A0B9	Guanine nucleotide-binding protein G(I) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.517
MS3_00187	MS3_02039	A0A094ZCU2	A0A094ZIQ6	Guanine nucleotide-binding protein G(O) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.545
MS3_00187	MS3_07317	A0A094ZCU2	A0A095A0B9	Guanine nucleotide-binding protein G(O) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.526
MS3_02039	MS3_00046	A0A094ZIQ6	A0A094ZCC5	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(I) subunit alpha.	0.560
MS3_02039	MS3_00187	A0A094ZIQ6	A0A094ZCU2	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.545
MS3_02039	MS3_06267	A0A094ZIQ6	A0A094ZSX3	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit alpha-12.	0.506
MS3_02039	MS3_06570	A0A094ZIQ6	A0A094ZYG7	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit alpha-14.	0.462
MS3_02039	MS3_06854	A0A094ZIQ6	A0A095AV78	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(I) subunit alpha.	0.556
MS3_04373	MS3_06570	A0A095AP77	A0A094ZYG7	Guanine nucleotide-binding protein G(Q) subunit alpha.	Guanine nucleotide-binding protein subunit alpha-14.	0.878
MS3_06267	MS3_02039	A0A094ZSX3	A0A094ZIQ6	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.506
MS3_06267	MS3_07317	A0A094ZSX3	A0A095A0B9	Guanine nucleotide-binding protein subunit alpha-12.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.456
MS3_06570	MS3_02039	A0A094ZYG7	A0A094ZIQ6	Guanine nucleotide-binding protein subunit alpha-14.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.462
MS3_06570	MS3_04373	A0A094ZYG7	A0A095AP77	Guanine nucleotide-binding protein subunit alpha-14.	Guanine nucleotide-binding protein G(Q) subunit alpha.	0.878
MS3_06854	MS3_02039	A0A095AV78	A0A094ZIQ6	Guanine nucleotide-binding protein G(I) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.556
MS3_06854	MS3_07317	A0A095AV78	A0A095A0B9	Guanine nucleotide-binding protein G(I) subunit alpha.	Guanine nucleotide-binding protein G(S) subunit alpha.	0.523
MS3_07317	MS3_00046	A0A095A0B9	A0A094ZCC5	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(I) subunit alpha.	0.517
MS3_07317	MS3_00187	A0A095A0B9	A0A094ZCU2	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(O) subunit alpha.	0.526
MS3_07317	MS3_06267	A0A095A0B9	A0A094ZSX3	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit alpha-12.	0.456
MS3_07317	MS3_06854	A0A095A0B9	A0A095AV78	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(I) subunit alpha.	0.523