31 items (Schistosoma haematobium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MS3_06842	DNA polymerase epsilon subunit 4. (92 aa)
	MS3_06732	Ubiquitin-60S ribosomal protein L40. (128 aa)
	MS3_04924	Uncharacterized protein C18H10.09. (846 aa)
	MS3_02369	DNA polymerase. (1151 aa)
	MS3_09276	Polyubiquitin-C. (228 aa)
	MS3_08597	Meiosis-specific with OB domain-containing protein. (411 aa)
	MS3_07383	DNA polymerase epsilon subunit 3. (218 aa)
	MS3_07252	DNA polymerase zeta catalytic subunit. (551 aa)
	MS3_06522	Uncharacterized protein. (835 aa)
	MS3_06279	DNA polymerase epsilon catalytic subunit A. (2580 aa)
	MS3_04176	Ubiquitin carboxyl-terminal hydrolase 3; Belongs to the peptidase C19 family. (622 aa)
	MS3_03802	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (775 aa)
	MS3_03520	Replication factor C subunit 1. (984 aa)
	MS3_03077	DNA polymerase eta. (765 aa)
	MS3_00668	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (528 aa)
	MS3_09691	Ubiquitin-40S ribosomal protein S27a. (152 aa)
	MS3_07258	DNA polymerase. (909 aa)
	MS3_06861	Replication factor C subunit 4. (331 aa)
	MS3_07689	SprT-like domain-containing protein Spartan. (243 aa)
	MS3_08253	ATPase family gene 2 protein; Belongs to the AAA ATPase family. (665 aa)
	MS3_05845	DNA polymerase delta small subunit. (534 aa)
	MS3_05372	KxDL motif-containing protein 1. (142 aa)
	MS3_06076	Uncharacterized protein. (148 aa)
	MS3_03716	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1138 aa)
	MS3_02254	Ubiquitin fusion degradation protein 1-like protein. (126 aa)
	MS3_01938	Proliferating cell nuclear antigen. (133 aa)
	MS3_03530	Replication factor C subunit 1. (1327 aa)
	MS3_01287	Replication factor C subunit 5. (171 aa)
	MS3_00172	DNA polymerase kappa. (1599 aa)
	MS3_11377	Replication factor C subunit 2. (143 aa)
	MS3_00697	Replication factor C subunit 3. (357 aa)

Your Current Organism:

Schistosoma haematobium

NCBI taxonomy Id: 6185
Other names: S. haematobium

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MS3_00172	MS3_00668	A0A094ZGQ3	A0A095AFA2	DNA polymerase kappa.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.625
MS3_00172	MS3_00697	A0A094ZGQ3	A0A094ZE01	DNA polymerase kappa.	Replication factor C subunit 3.	0.677
MS3_00172	MS3_01287	A0A094ZGQ3	A0A094ZGX2	DNA polymerase kappa.	Replication factor C subunit 5.	0.681
MS3_00172	MS3_01938	A0A094ZGQ3	A0A094ZLG4	DNA polymerase kappa.	Proliferating cell nuclear antigen.	0.976
MS3_00172	MS3_02254	A0A094ZGQ3	A0A094ZM42	DNA polymerase kappa.	Ubiquitin fusion degradation protein 1-like protein.	0.571
MS3_00172	MS3_02369	A0A094ZGQ3	A0A095BYG2	DNA polymerase kappa.	DNA polymerase.	0.786
MS3_00172	MS3_03077	A0A094ZGQ3	A0A095AL73	DNA polymerase kappa.	DNA polymerase eta.	0.851
MS3_00172	MS3_03520	A0A094ZGQ3	A0A095AMA9	DNA polymerase kappa.	Replication factor C subunit 1.	0.606
MS3_00172	MS3_03530	A0A094ZGQ3	A0A094ZKY0	DNA polymerase kappa.	Replication factor C subunit 1.	0.606
MS3_00172	MS3_03716	A0A094ZGQ3	A0A094ZN12	DNA polymerase kappa.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.967
MS3_00172	MS3_04924	A0A094ZGQ3	A0A095C469	DNA polymerase kappa.	Uncharacterized protein C18H10.09.	0.642
MS3_00172	MS3_05845	A0A094ZGQ3	A0A094ZWE8	DNA polymerase kappa.	DNA polymerase delta small subunit.	0.766
MS3_00172	MS3_06279	A0A094ZGQ3	A0A095ATW3	DNA polymerase kappa.	DNA polymerase epsilon catalytic subunit A.	0.791
MS3_00172	MS3_06522	A0A094ZGQ3	A0A095AUI5	DNA polymerase kappa.	Uncharacterized protein.	0.600
MS3_00172	MS3_06732	A0A094ZGQ3	A0A095C853	DNA polymerase kappa.	Ubiquitin-60S ribosomal protein L40.	0.730
MS3_00172	MS3_06842	A0A094ZGQ3	A0A094ZUB7	DNA polymerase kappa.	DNA polymerase epsilon subunit 4.	0.629
MS3_00172	MS3_06861	A0A094ZGQ3	A0A094ZZ42	DNA polymerase kappa.	Replication factor C subunit 4.	0.690
MS3_00172	MS3_07252	A0A094ZGQ3	A0A095AW69	DNA polymerase kappa.	DNA polymerase zeta catalytic subunit.	0.867
MS3_00172	MS3_07258	A0A094ZGQ3	A0A095A074	DNA polymerase kappa.	DNA polymerase.	0.867
MS3_00172	MS3_07383	A0A094ZGQ3	A0A095AWF3	DNA polymerase kappa.	DNA polymerase epsilon subunit 3.	0.638