27 items (Schistosoma haematobium) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MS3_00473	GTPase HRas. (160 aa)
	MS3_07860	Fibronectin type-III domain-containing protein 3A. (671 aa)
	MS3_00510	Uncharacterized protein. (230 aa)
	MS3_01904	Calcium/calmodulin-dependent protein kinase type II subunit delta. (506 aa)
	MS3_06863	Uncharacterized protein. (274 aa)
	MS3_09648	Uncharacterized protein. (157 aa)
	MS3_02928	Putative serine/threonine-protein phosphatase PP2A regulatory subunit. (516 aa)
	MS3_05453	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform. (174 aa)
	MS3_05703	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A gamma isoform. (213 aa)
	MS3_04355	Ras-related protein Ral-A. (147 aa)
	MS3_02780	Ras-related protein Ral-A. (168 aa)
	MS3_04349	Ras-related protein O-RAL. (72 aa)
	MS3_02394	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform. (373 aa)
	MS3_05700	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (627 aa)
	MS3_05437	Serine/threonine-protein phosphatase. (215 aa)
	MS3_07858	Fibronectin type III domain-containing protein 3B. (2026 aa)
	MS3_00497	Uncharacterized protein. (897 aa)
	MS3_09240	Prohibitin. (203 aa)
	MS3_10266	BRCA1-associated protein. (169 aa)
	MS3_10055	BRCA1-associated protein. (166 aa)
	MS3_08696	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (594 aa)
	MS3_08656	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform. (748 aa)
	MS3_02384	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform. (250 aa)
	MS3_11054	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (244 aa)
	MS3_01526	Serine/threonine-protein kinase-transforming protein Rmil. (1307 aa)
	MS3_08613	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (389 aa)
	MS3_05061	Mitogen-activated protein kinase kinase kinase 10. (1598 aa)

Your Current Organism:

Schistosoma haematobium

NCBI taxonomy Id: 6185
Other names: S. haematobium

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MS3_00473	MS3_01526	A0A094ZF04	A0A094ZFX2	GTPase HRas.	Serine/threonine-protein kinase-transforming protein Rmil.	0.989
MS3_00473	MS3_01904	A0A094ZF04	A0A094ZGU7	GTPase HRas.	Calcium/calmodulin-dependent protein kinase type II subunit delta.	0.415
MS3_00473	MS3_05061	A0A094ZF04	A0A094ZRK1	GTPase HRas.	Mitogen-activated protein kinase kinase kinase 10.	0.416
MS3_00473	MS3_05437	A0A094ZF04	A0A094ZVD6	GTPase HRas.	Serine/threonine-protein phosphatase.	0.461
MS3_00473	MS3_08613	A0A094ZF04	A0A094ZYV9	GTPase HRas.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.617
MS3_00473	MS3_08696	A0A094ZF04	A0A095A0I9	GTPase HRas.	Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.	0.403
MS3_00473	MS3_09240	A0A094ZF04	A0A095A5A5	GTPase HRas.	Prohibitin.	0.437
MS3_00473	MS3_09648	A0A094ZF04	A0A095CEE5	GTPase HRas.	Uncharacterized protein.	0.617
MS3_00473	MS3_10055	A0A094ZF04	A0A095A2K4	GTPase HRas.	BRCA1-associated protein.	0.428
MS3_00473	MS3_10266	A0A094ZF04	A0A095A4D6	GTPase HRas.	BRCA1-associated protein.	0.428
MS3_00497	MS3_00510	A0A095AEV1	A0A094ZDJ6	Uncharacterized protein.	Uncharacterized protein.	0.637
MS3_00497	MS3_02384	A0A095AEV1	A0A094ZJP4	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform.	0.595
MS3_00497	MS3_02394	A0A095AEV1	A0A095AJG8	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform.	0.595
MS3_00497	MS3_05437	A0A095AEV1	A0A094ZVD6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.808
MS3_00497	MS3_05453	A0A095AEV1	A0A095C5F0	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform.	0.595
MS3_00497	MS3_08656	A0A095AEV1	A0A095A0E0	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform.	0.595
MS3_00510	MS3_00497	A0A094ZDJ6	A0A095AEV1	Uncharacterized protein.	Uncharacterized protein.	0.637
MS3_00510	MS3_02384	A0A094ZDJ6	A0A094ZJP4	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform.	0.595
MS3_00510	MS3_02394	A0A094ZDJ6	A0A095AJG8	Uncharacterized protein.	Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform.	0.595
MS3_00510	MS3_05437	A0A094ZDJ6	A0A094ZVD6	Uncharacterized protein.	Serine/threonine-protein phosphatase.	0.808