STRINGSTRING
MMP9 MMP9 MMP2 MMP2 TIMP1 TIMP1 MMP1 MMP1 MMP3 MMP3 OPN1SW OPN1SW OPN3 OPN3 MME MME OPN5 OPN5 PPID PPID
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
MMP9Matrix metallopeptidase 9. (692 aa)
MMP2Matrix metallopeptidase 2. (647 aa)
TIMP1NTR domain-containing protein. (166 aa)
MMP1Matrix metallopeptidase 1. (470 aa)
MMP3Matrix metallopeptidase 3. (477 aa)
OPN1SWOpsin 1, short wave sensitive. (348 aa)
OPN3Opsin 3; Belongs to the G-protein coupled receptor 1 family. (336 aa)
MMEMembrane metalloendopeptidase. (750 aa)
OPN5Opsin 5; Belongs to the G-protein coupled receptor 1 family. (382 aa)
PPIDPeptidylprolyl isomerase D. (370 aa)
Your Current Organism:
Nomascus leucogenys
NCBI taxonomy Id: 61853
Other names: Hylobates concolor leucogenys, Hylobates concolor leucogyneus, Hylobates leucogenys, Hylobates leucogenys leucogenys, N. leucogenys, Nomascus leucogenys leucogenys, Nomascus leukogenys, White-cheeked Gibbon, northern white-cheeked gibbon
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