(10 nodes) Nuclear pore outer ring, and Nuclear pore inner ring network (Spathaspora passalidarum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G3AER4_SPAPN	Peptidase S59 domain-containing protein. (1187 aa)
	G3AGI9_SPAPN	Uncharacterized protein. (1446 aa)
	G3AH81_SPAPN	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (614 aa)
	G3AI76_SPAPN	Nup54 domain-containing protein. (558 aa)
	G3AJD2_SPAPN	Uncharacterized protein. (1922 aa)
	G3AKV8_SPAPN	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (350 aa)
	G3ALR3_SPAPN	Uncharacterized protein. (1138 aa)
	G3APE4_SPAPN	RanBD1 domain-containing protein. (784 aa)
	G3AQS8_SPAPN	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (740 aa)
	G3AUK0_SPAPN	Uncharacterized protein. (1132 aa)

Your Current Organism:

Spathaspora passalidarum

NCBI taxonomy Id: 619300
Other names: S. passalidarum NRRL Y-27907, Spathaspora passalidarum NRRL Y-27907

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3AER4_SPAPN	G3AGI9_SPAPN	G3AER4	G3AGI9	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.934
G3AER4_SPAPN	G3AH81_SPAPN	G3AER4	G3AH81	Peptidase S59 domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.997
G3AER4_SPAPN	G3AI76_SPAPN	G3AER4	G3AI76	Peptidase S59 domain-containing protein.	Nup54 domain-containing protein.	0.930
G3AER4_SPAPN	G3AJD2_SPAPN	G3AER4	G3AJD2	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.917
G3AER4_SPAPN	G3AKV8_SPAPN	G3AER4	G3AKV8	Peptidase S59 domain-containing protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.962
G3AER4_SPAPN	G3ALR3_SPAPN	G3AER4	G3ALR3	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.948
G3AER4_SPAPN	G3APE4_SPAPN	G3AER4	G3APE4	Peptidase S59 domain-containing protein.	RanBD1 domain-containing protein.	0.998
G3AER4_SPAPN	G3AQS8_SPAPN	G3AER4	G3AQS8	Peptidase S59 domain-containing protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.986
G3AER4_SPAPN	G3AUK0_SPAPN	G3AER4	G3AUK0	Peptidase S59 domain-containing protein.	Uncharacterized protein.	0.999
G3AGI9_SPAPN	G3AER4_SPAPN	G3AGI9	G3AER4	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.934
G3AGI9_SPAPN	G3AH81_SPAPN	G3AGI9	G3AH81	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.992
G3AGI9_SPAPN	G3AI76_SPAPN	G3AGI9	G3AI76	Uncharacterized protein.	Nup54 domain-containing protein.	0.998
G3AGI9_SPAPN	G3AJD2_SPAPN	G3AGI9	G3AJD2	Uncharacterized protein.	Uncharacterized protein.	0.999
G3AGI9_SPAPN	G3AKV8_SPAPN	G3AGI9	G3AKV8	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.992
G3AGI9_SPAPN	G3ALR3_SPAPN	G3AGI9	G3ALR3	Uncharacterized protein.	Uncharacterized protein.	0.987
G3AGI9_SPAPN	G3APE4_SPAPN	G3AGI9	G3APE4	Uncharacterized protein.	RanBD1 domain-containing protein.	0.999
G3AGI9_SPAPN	G3AQS8_SPAPN	G3AGI9	G3AQS8	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.998
G3AGI9_SPAPN	G3AUK0_SPAPN	G3AGI9	G3AUK0	Uncharacterized protein.	Uncharacterized protein.	0.999
G3AH81_SPAPN	G3AER4_SPAPN	G3AH81	G3AER4	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Peptidase S59 domain-containing protein.	0.997
G3AH81_SPAPN	G3AGI9_SPAPN	G3AH81	G3AGI9	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	Uncharacterized protein.	0.992