(27 nodes) Nephrin family interactions, and Immunoglobulin subtype network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_15532	Ig-like domain-containing protein. (238 aa)
	T265_10050	Uncharacterized protein. (1336 aa)
	T265_10412	Uncharacterized protein. (94 aa)
	T265_09086	Uncharacterized protein. (583 aa)
	T265_14559	Uncharacterized protein. (2220 aa)
	T265_14928	Uncharacterized protein. (1708 aa)
	T265_08068	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (389 aa)
	T265_07933	Fibronectin type-III domain-containing protein. (799 aa)
	T265_07038	Uncharacterized protein. (1615 aa)
	T265_15076	Uncharacterized protein. (831 aa)
	T265_07040	Uncharacterized protein. (1946 aa)
	T265_10040	Uncharacterized protein. (928 aa)
	T265_14083	Ig-like domain-containing protein. (568 aa)
	T265_05528	Uncharacterized protein. (264 aa)
	T265_08103	Ig-like domain-containing protein. (591 aa)
	T265_13553	Ig-like domain-containing protein. (296 aa)
	T265_04153	Ig-like domain-containing protein. (259 aa)
	T265_04089	Bravo_FIGEY domain-containing protein. (647 aa)
	T265_02573	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (2801 aa)
	T265_02206	Uncharacterized protein. (1757 aa)
	T265_12810	Uncharacterized protein. (406 aa)
	T265_01760	Uncharacterized protein. (954 aa)
	T265_02008	Uncharacterized protein. (1698 aa)
	T265_03694	Uncharacterized protein. (1798 aa)
	T265_08102	Uncharacterized protein. (1020 aa)
	T265_14339	Uncharacterized protein. (1838 aa)
	T265_12449	Uncharacterized protein. (429 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01760	T265_02206	A0A074ZYJ5	A0A074ZVR8	Uncharacterized protein.	Uncharacterized protein.	0.988
T265_01760	T265_07933	A0A074ZYJ5	A0A074ZB74	Uncharacterized protein.	Fibronectin type-III domain-containing protein.	0.490
T265_01760	T265_08102	A0A074ZYJ5	A0A075A9K2	Uncharacterized protein.	Uncharacterized protein.	0.490
T265_01760	T265_08103	A0A074ZYJ5	A0A074ZLF0	Uncharacterized protein.	Ig-like domain-containing protein.	0.490
T265_01760	T265_09086	A0A074ZYJ5	A0A074Z740	Uncharacterized protein.	Uncharacterized protein.	0.628
T265_02008	T265_14559	A0A075A0K1	A0A074Z9C3	Uncharacterized protein.	Uncharacterized protein.	0.492
T265_02206	T265_01760	A0A074ZVR8	A0A074ZYJ5	Uncharacterized protein.	Uncharacterized protein.	0.988
T265_02206	T265_09086	A0A074ZVR8	A0A074Z740	Uncharacterized protein.	Uncharacterized protein.	0.700
T265_02206	T265_14559	A0A074ZVR8	A0A074Z9C3	Uncharacterized protein.	Uncharacterized protein.	0.492
T265_02573	T265_07038	A0A074ZUJ1	A0A074ZE16	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.412
T265_02573	T265_07040	A0A074ZUJ1	A0A074ZEC5	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.779
T265_02573	T265_10040	A0A074ZUJ1	A0A074ZEQ2	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.765
T265_02573	T265_10050	A0A074ZUJ1	A0A074Z3P4	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.979
T265_02573	T265_12810	A0A074ZUJ1	A0A074ZYD6	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.623
T265_02573	T265_13553	A0A074ZUJ1	A0A074ZMJ1	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Ig-like domain-containing protein.	0.433
T265_02573	T265_15076	A0A074ZUJ1	A0A074ZE68	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.	Uncharacterized protein.	0.508
T265_04089	T265_07040	A0A074ZQ84	A0A074ZEC5	Bravo_FIGEY domain-containing protein.	Uncharacterized protein.	0.591
T265_04153	T265_12810	A0A074ZP30	A0A074ZYD6	Ig-like domain-containing protein.	Uncharacterized protein.	0.569
T265_04153	T265_13553	A0A074ZP30	A0A074ZMJ1	Ig-like domain-containing protein.	Ig-like domain-containing protein.	0.569
T265_05528	T265_10050	A0A074ZJB1	A0A074Z3P4	Uncharacterized protein.	Uncharacterized protein.	0.430