(6 nodes) Transcription factor TFIID complex network (Opisthorchis viverrini)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_10984	Uncharacterized protein. (2803 aa)
	T265_14113	Reverse transcriptase domain-containing protein. (1401 aa)
	T265_04366	TAFH domain-containing protein. (725 aa)
	T265_01621	TAFII55_N domain-containing protein. (462 aa)
	T265_10220	Uncharacterized protein. (840 aa)
	T265_14412	TFIID_20kDa domain-containing protein. (473 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_01621	T265_04366	A0A074ZYR4	A0A074ZST7	TAFII55_N domain-containing protein.	TAFH domain-containing protein.	0.999
T265_01621	T265_10220	A0A074ZYR4	A0A075A228	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.999
T265_01621	T265_10984	A0A074ZYR4	A0A074Z4N0	TAFII55_N domain-containing protein.	Uncharacterized protein.	0.999
T265_01621	T265_14113	A0A074ZYR4	A0A074ZFB4	TAFII55_N domain-containing protein.	Reverse transcriptase domain-containing protein.	0.999
T265_01621	T265_14412	A0A074ZYR4	A0A075AA86	TAFII55_N domain-containing protein.	TFIID_20kDa domain-containing protein.	0.999
T265_04366	T265_01621	A0A074ZST7	A0A074ZYR4	TAFH domain-containing protein.	TAFII55_N domain-containing protein.	0.999
T265_04366	T265_10220	A0A074ZST7	A0A075A228	TAFH domain-containing protein.	Uncharacterized protein.	0.999
T265_04366	T265_10984	A0A074ZST7	A0A074Z4N0	TAFH domain-containing protein.	Uncharacterized protein.	0.999
T265_04366	T265_14113	A0A074ZST7	A0A074ZFB4	TAFH domain-containing protein.	Reverse transcriptase domain-containing protein.	0.999
T265_04366	T265_14412	A0A074ZST7	A0A075AA86	TAFH domain-containing protein.	TFIID_20kDa domain-containing protein.	0.999
T265_10220	T265_01621	A0A075A228	A0A074ZYR4	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.999
T265_10220	T265_04366	A0A075A228	A0A074ZST7	Uncharacterized protein.	TAFH domain-containing protein.	0.999
T265_10220	T265_10984	A0A075A228	A0A074Z4N0	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_10220	T265_14113	A0A075A228	A0A074ZFB4	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.999
T265_10220	T265_14412	A0A075A228	A0A075AA86	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.999
T265_10984	T265_01621	A0A074Z4N0	A0A074ZYR4	Uncharacterized protein.	TAFII55_N domain-containing protein.	0.999
T265_10984	T265_04366	A0A074Z4N0	A0A074ZST7	Uncharacterized protein.	TAFH domain-containing protein.	0.999
T265_10984	T265_10220	A0A074Z4N0	A0A075A228	Uncharacterized protein.	Uncharacterized protein.	0.999
T265_10984	T265_14113	A0A074Z4N0	A0A074ZFB4	Uncharacterized protein.	Reverse transcriptase domain-containing protein.	0.999
T265_10984	T265_14412	A0A074Z4N0	A0A075AA86	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.999