55 items (Opisthorchis viverrini) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	T265_16170	Uncharacterized protein. (153 aa)
	T265_16217	Uncharacterized protein. (71 aa)
	T265_16095	ABC transmembrane type-1 domain-containing protein. (220 aa)
	T265_15838	ABC transporter domain-containing protein. (115 aa)
	T265_15849	ABC transporter domain-containing protein. (141 aa)
	T265_15560	Uncharacterized protein. (128 aa)
	T265_12390	Uncharacterized protein. (56 aa)
	T265_16324	ABC transporter domain-containing protein. (74 aa)
	T265_10023	Uncharacterized protein. (832 aa)
	T265_09965	ABC transporter domain-containing protein. (786 aa)
	T265_09531	Ion_trans_N domain-containing protein. (196 aa)
	T265_11952	Uncharacterized protein. (429 aa)
	T265_07490	Uncharacterized protein. (547 aa)
	T265_15097	Uncharacterized protein. (2010 aa)
	T265_06998	Uncharacterized protein. (1007 aa)
	T265_06953	Cyclic nucleotide-binding domain-containing protein. (1011 aa)
	T265_09890	ABC transporter domain-containing protein. (273 aa)
	T265_14875	Ion_trans domain-containing protein. (188 aa)
	T265_14260	ABC transmembrane type-1 domain-containing protein. (174 aa)
	T265_06068	Uncharacterized protein. (475 aa)
	T265_05390	Uncharacterized protein. (179 aa)
	T265_04715	Uncharacterized protein. (191 aa)
	T265_13367	Uncharacterized protein. (1184 aa)
	T265_06759	ABC transporter domain-containing protein. (263 aa)
	T265_03829	Uncharacterized protein. (1127 aa)
	T265_03438	Uncharacterized protein. (121 aa)
	T265_13120	Cyclic nucleotide-binding domain-containing protein. (1164 aa)
	T265_06031	Uncharacterized protein. (92 aa)
	T265_13320	Uncharacterized protein. (202 aa)
	T265_11951	ABC transmembrane type-1 domain-containing protein. (533 aa)
	T265_15559	Uncharacterized protein. (1071 aa)
	T265_05179	Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (457 aa)
	T265_11481	Cyclic nucleotide-binding domain-containing protein. (901 aa)
	T265_12779	Uncharacterized protein. (687 aa)
	T265_12799	Ion_trans domain-containing protein. (103 aa)
	T265_02332	SOCS box domain-containing protein. (440 aa)
	T265_00844	Uncharacterized protein. (321 aa)
	T265_13344	Uncharacterized protein. (1205 aa)
	T265_01461	Ion_trans_N domain-containing protein. (290 aa)
	T265_15006	Uncharacterized protein. (1108 aa)
	T265_12778	ABC transmembrane type-1 domain-containing protein. (582 aa)
	T265_00170	Uncharacterized protein. (1171 aa)
	T265_09530	Cyclic nucleotide-binding domain-containing protein. (301 aa)
	T265_03007	Uncharacterized protein. (187 aa)
	T265_09100	Uncharacterized protein. (292 aa)
	T265_08932	ABC transporter domain-containing protein. (960 aa)
	T265_01460	Cyclic nucleotide-binding domain-containing protein. (425 aa)
	T265_07485	Uncharacterized protein. (1193 aa)
	T265_14121	Uncharacterized protein. (1310 aa)
	T265_14100	Uncharacterized protein. (251 aa)
	T265_06555	Uncharacterized protein. (924 aa)
	T265_13996	ABC transmembrane type-1 domain-containing protein. (480 aa)
	T265_13503	Uncharacterized protein. (1462 aa)
	T265_03772	Uncharacterized protein. (2837 aa)
	T265_13321	Uncharacterized protein. (751 aa)

Your Current Organism:

Opisthorchis viverrini

NCBI taxonomy Id: 6198
Other names: O. viverrini, Southeast Asian liver fluke

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T265_00170	T265_10023	A0A075A3S7	A0A074Z3R2	Uncharacterized protein.	Uncharacterized protein.	0.401
T265_01460	T265_12799	A0A075A9H8	A0A074ZZ97	Cyclic nucleotide-binding domain-containing protein.	Ion_trans domain-containing protein.	0.733
T265_01460	T265_14875	A0A075A9H8	A0A074ZGI1	Cyclic nucleotide-binding domain-containing protein.	Ion_trans domain-containing protein.	0.897
T265_03438	T265_14100	A0A074ZRL8	A0A075ADD5	Uncharacterized protein.	Uncharacterized protein.	0.606
T265_03772	T265_13321	A0A075AHC9	A0A075AHD0	Uncharacterized protein.	Uncharacterized protein.	0.426
T265_03772	T265_14100	A0A075AHC9	A0A075ADD5	Uncharacterized protein.	Uncharacterized protein.	0.606
T265_03829	T265_06555	A0A074ZRA1	A0A075ADM6	Uncharacterized protein.	Uncharacterized protein.	0.642
T265_03829	T265_09890	A0A074ZRA1	A0A074ZF75	Uncharacterized protein.	ABC transporter domain-containing protein.	0.446
T265_03829	T265_10023	A0A074ZRA1	A0A074Z3R2	Uncharacterized protein.	Uncharacterized protein.	0.783
T265_03829	T265_12778	A0A074ZRA1	A0A075A387	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.411
T265_03829	T265_12779	A0A074ZRA1	A0A074ZZ34	Uncharacterized protein.	Uncharacterized protein.	0.419
T265_06068	T265_06759	A0A074ZIA6	A0A074ZR72	Uncharacterized protein.	ABC transporter domain-containing protein.	0.423
T265_06068	T265_10023	A0A074ZIA6	A0A074Z3R2	Uncharacterized protein.	Uncharacterized protein.	0.474
T265_06068	T265_11951	A0A074ZIA6	A0A074ZVL7	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.704
T265_06068	T265_12778	A0A074ZIA6	A0A075A387	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.408
T265_06068	T265_12779	A0A074ZIA6	A0A074ZZ34	Uncharacterized protein.	Uncharacterized protein.	0.408
T265_06068	T265_13996	A0A074ZIA6	A0A075AE29	Uncharacterized protein.	ABC transmembrane type-1 domain-containing protein.	0.910
T265_06555	T265_03829	A0A075ADM6	A0A074ZRA1	Uncharacterized protein.	Uncharacterized protein.	0.642
T265_06759	T265_06068	A0A074ZR72	A0A074ZIA6	ABC transporter domain-containing protein.	Uncharacterized protein.	0.423
T265_06759	T265_11951	A0A074ZR72	A0A074ZVL7	ABC transporter domain-containing protein.	ABC transmembrane type-1 domain-containing protein.	0.514